RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 NAA20P61599 178 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 HERVK_113P63132 956 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 CDKL1Q00532 357 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 DMPKQ09013 629 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 RPA4Q13156 261 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 NFATC4Q14934 902 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.45□□□□□ -0.42
DDX39A-202ENST00000324340 ZNF678Q5SXM1 525 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 DOK6Q6PKX4 331 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 CRTC3Q6UUV7 619 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 ABI3BPQ7Z7G0 1075 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 FRMD1Q8N878 549 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 PDPRQ8NCN5 879 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 CADM4Q8NFZ8 388 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 RLN3Q8WXF3 142 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 ASB11Q8WXH4 323 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 DLG3Q92796 817 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 MPP4Q96JB8 637 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 CNDP1Q96KN2 507 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 SORT1Q99523 831 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 SLC12A9Q9BXP2 914 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 ERVK-6Q9BXR3 956 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 MRPS26Q9BYN8 205 aaKnown RBP12.45□□□□□ -0.42
DDX39A-202ENST00000324340 KLHL4Q9C0H6 718 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 DPEP2Q9H4A9 486 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 FAIMQ9NVQ4 179 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 NCKIPSDQ9NZQ3 722 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 G3BP2Q9UN86 482 aaKnown RBP12.45□□□□□ -0.42
DDX39A-202ENST00000324340 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.45□□□□□ -0.42
DDX39A-202ENST00000324340 CCDC163A0A0D9SF12 145 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 A0A1W2PPC4 97 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 PRR19A6NJB7 356 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 METTL12A8MUP2 240 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 SUPT3HB4E1H0 165 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 TNFRSF10CO14798 259 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 PI15O43692 258 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 ITM2AO43736 263 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 KCNJ13O60928 360 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 PSIP1O75475 530 aaKnown RBP12.44□□□□□ -0.42
DDX39A-202ENST00000324340 SUPT3HO75486 399 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 ZCCHC18P0CG32 403 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 AOC1P19801 751 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 KELP23276 732 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 GALNT1Q10472 559 aaPredicted RBP12.44□□□□□ -0.42
DDX39A-202ENST00000324340 PHKG1Q16816 387 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 PFKFB4Q16877 469 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 SYTL3Q4VX76 610 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 TJAP1Q5JTD0 557 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 DHRS4L2Q6PKH6 230 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 ATG14Q6ZNE5 492 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 RINLQ6ZS11 566 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 CCDC80Q76M96 950 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 DHDDSQ86SQ9 333 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 AMZ2Q86W34 360 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 CFAP206Q8IYR0 622 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 FBXO39Q8N4B4 442 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 LILRA3Q8N6C8 439 aaPredicted RBP12.44□□□□□ -0.42
DDX39A-202ENST00000324340 PTGR2Q8N8N7 351 aaPredicted RBP12.44□□□□□ -0.42
DDX39A-202ENST00000324340 CATSPER1Q8NEC5 780 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 FAM174AQ8TBP5 190 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 MYOCQ99972 504 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 TIMM29Q9BSF4 260 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 ZNF395Q9H8N7 513 aaPredicted RBP12.44□□□□□ -0.42
DDX39A-202ENST00000324340 S100A14Q9HCY8 104 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 GPR27Q9NS67 375 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 TAGLN3Q9UI15 199 aa12.44□□□□□ -0.42
DDX39A-202ENST00000324340 CAPN14A8MX76 684 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 H0Y8X5 98 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 H3BM21 787 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 AXIN1O15169 862 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 FFAR2O15552 330 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 HNRNPRO43390 633 aaKnown RBP12.43□□□□□ -0.42
DDX39A-202ENST00000324340 DCXO43602 365 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 LYPLA1O75608 230 aaPredicted RBP12.43□□□□□ -0.42
DDX39A-202ENST00000324340 PDGFBP01127 241 aaPredicted RBP12.43□□□□□ -0.42
DDX39A-202ENST00000324340 GFAPP14136 432 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 VCLP18206 1134 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 PBLDP30039 288 aaPredicted RBP12.43□□□□□ -0.42
DDX39A-202ENST00000324340 RABIFP47224 123 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 PREPP48147 710 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 HSPA13P48723 471 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 PXNP49023 591 aaPredicted RBP12.43□□□□□ -0.42
DDX39A-202ENST00000324340 NFE2L1Q14494 772 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 PDCD4Q53EL6 469 aaKnown RBP12.43□□□□□ -0.42
DDX39A-202ENST00000324340 PYCR3Q53H96 274 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 UNC50Q53HI1 259 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 METRNLQ641Q3 311 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 METTL2BQ6P1Q9 378 aaKnown RBP12.43□□□□□ -0.42
DDX39A-202ENST00000324340 FAM83HQ6ZRV2 1179 aaPredicted RBP12.43□□□□□ -0.42
DDX39A-202ENST00000324340 FRMD7Q6ZUT3 714 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 FRA10AC1Q70Z53 315 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 UBE2R2Q712K3 238 aaPredicted RBP12.43□□□□□ -0.42
DDX39A-202ENST00000324340 RAB44Q7Z6P3 723 aaPredicted RBP12.43□□□□□ -0.42
DDX39A-202ENST00000324340 LSMEM2Q8N112 164 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 FAM160A2Q8N612 972 aaPredicted RBP12.43□□□□□ -0.42
DDX39A-202ENST00000324340 FBXO15Q8NCQ5 510 aaPredicted RBP12.43□□□□□ -0.42
DDX39A-202ENST00000324340 OR56A4Q8NGH8 313 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 EXT2Q93063 718 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 PHF21BQ96EK2 531 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 WDR92Q96MX6 357 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms