RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 GSTM4Q03013 218 aa13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 SKIV2LQ15477 1246 aaKnown RBP13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 SPRED1Q7Z699 444 aa13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 HIPK1Q86Z02 1210 aa13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 ADGRG2Q8IZP9 1017 aa13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 TRUB1Q8WWH5 349 aaKnown RBP13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 MAL2Q969L2 176 aa13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 PPP3R2Q96LZ3 170 aa13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 ZNF583Q96ND8 569 aa13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 GPR62Q9BZJ7 368 aa13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 TMEM248Q9NWD8 314 aa13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 ABCD2Q9UBJ2 740 aa13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 SARDHQ9UL12 918 aa13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 TPRKBQ9Y3C4 175 aa13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 RLFQ13129 1914 aa13.03□□□□□ -0.32
TNFRSF21-201ENST00000296861 KPNA5O15131 536 aa13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 TACR1P25103 407 aa13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 MZF1P28698 734 aaPredicted RBP13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 ZNF648Q5T619 568 aaPredicted RBP13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 FAM171BQ6P995 826 aa13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 ANKS3Q6ZW76 656 aa13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 TMEM132CQ8N3T6 1108 aa13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 STX19Q8N4C7 294 aa13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 CD200R1Q8TD46 325 aa13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 GTF3C2Q8WUA4 911 aaPredicted RBP13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 REEP1Q9H902 201 aa13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 NTN4Q9HB63 628 aa13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 CSNK1G1Q9HCP0 422 aa13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 SLC6A13Q9NSD5 602 aa13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 SPASTQ9UBP0 616 aa13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 ARID1BQ8NFD5 2236 aaPredicted RBP13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 MROH6A6NGR9 719 aa13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 SAP18O00422 153 aaKnown RBP13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 ITGALP20701 1170 aa13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 HTR1EP28566 365 aa13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 OR1D2P34982 312 aa13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 DCTP40126 519 aa13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 NR4A2P43354 598 aa13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 EMX1Q04741 257 aaPredicted RBP13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 MED22Q15528 200 aa13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 PARP15Q460N3 678 aa13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 ADAMTSL2Q86TH1 951 aa13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 LRRC49Q8IUZ0 686 aa13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 PHYKPLQ8IUZ5 450 aa13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 OR13F1Q8NGS4 319 aa13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 SH3YL1Q96HL8 342 aaPredicted RBP13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 ZFYVE19Q96K21 471 aa13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 KCNS3Q9BQ31 491 aa13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 POU2F3Q9UKI9 436 aa13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 PCDHB14Q9Y5E9 798 aa13.02□□□□□ -0.32
TNFRSF21-201ENST00000296861 PRAMEF11O60813 436 aa13.02□□□□□ -0.33
TNFRSF21-201ENST00000296861 PAPSS2O95340 614 aaPredicted RBP13.02□□□□□ -0.33
TNFRSF21-201ENST00000296861 MATN4O95460 622 aa13.02□□□□□ -0.33
TNFRSF21-201ENST00000296861 KRT6AP02538 564 aa13.02□□□□□ -0.33
TNFRSF21-201ENST00000296861 KRT6BP04259 564 aa13.02□□□□□ -0.33
TNFRSF21-201ENST00000296861 CRATP43155 626 aa13.02□□□□□ -0.33
TNFRSF21-201ENST00000296861 KRT6CP48668 564 aa13.02□□□□□ -0.33
TNFRSF21-201ENST00000296861 ATP4BP51164 291 aa13.02□□□□□ -0.33
TNFRSF21-201ENST00000296861 TAB1Q15750 504 aa13.02□□□□□ -0.33
TNFRSF21-201ENST00000296861 DHRS4L2Q6PKH6 230 aa13.02□□□□□ -0.33
TNFRSF21-201ENST00000296861 CACTIN-AS1Q8N1I8 211 aa13.02□□□□□ -0.33
TNFRSF21-201ENST00000296861 C7orf57Q8NEG2 295 aa13.02□□□□□ -0.33
TNFRSF21-201ENST00000296861 GPRC5BQ9NZH0 403 aa13.02□□□□□ -0.33
TNFRSF21-201ENST00000296861 ARIH1Q9Y4X5 557 aaPredicted RBP13.02□□□□□ -0.33
TNFRSF21-201ENST00000296861 FAM155AB1AL88 458 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 IFRD1O00458 451 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 SNPHO15079 494 aa13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 PEX11BO96011 259 aa13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 OGNP20774 298 aaKnown RBP13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 SLC6A4P31645 630 aa13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 SGSHP51688 502 aa13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 ABRQ12979 859 aa13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 CYP4Z1Q86W10 505 aa13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 FAR1Q8WVX9 515 aa13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 GTPBP3Q969Y2 492 aaKnown RBP13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 UHRF1Q96T88 793 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 USE1Q9NZ43 259 aa13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 A0A096LPI6 279 aa13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 ZNF701M0R085 212 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 E2F3O00716 465 aa13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 RGS10O43665 173 aa13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 OXSR1O95747 527 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 RPS17P08708 135 aaKnown RBP13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 ZNF865P0CJ78 1059 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 C21orf33P30042 268 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 RPIAP49247 311 aa13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 TMBIM6P55061 237 aa13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 NFKB2Q00653 900 aa13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 MXD1Q05195 221 aa13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 PCBP1Q15365 356 aaKnown RBP eCLIP13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 FAM217AQ8IXS0 508 aa13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 TAGAPQ8N103 731 aa13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 SCML4Q8N228 414 aa13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 RHEBL1Q8TAI7 183 aa13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 LKAAEAR1Q8TD35 194 aa13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 CHPT1Q8WUD6 406 aa13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 MYLIPQ8WY64 445 aa13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 CRISPLD1Q9H336 500 aa13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 RNF167Q9H6Y7 350 aa13.01□□□□□ -0.33
TNFRSF21-201ENST00000296861 C14orf119Q9NWQ9 140 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms