RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 RDH11Q8TC12 318 aa17.32■□□□□ 0.36
CCDC78-201ENST00000293889 PAIP2Q9BPZ3 127 aaKnown RBP17.32■□□□□ 0.36
CCDC78-201ENST00000293889 IMP3Q9NV31 184 aaKnown RBP17.32■□□□□ 0.36
CCDC78-201ENST00000293889 PTPRZ1P23471 2315 aaPredicted RBP17.31■□□□□ 0.36
CCDC78-201ENST00000293889 TRBV23OR9-2A0A075B6M9 112 aa17.31■□□□□ 0.36
CCDC78-201ENST00000293889 KRT87PA6NCN2 255 aa17.31■□□□□ 0.36
CCDC78-201ENST00000293889 NEMP2A6NFY4 417 aa17.31■□□□□ 0.36
CCDC78-201ENST00000293889 SYCE1LA8MT33 242 aa17.31■□□□□ 0.36
CCDC78-201ENST00000293889 VGLL3A8MV65 326 aa17.31■□□□□ 0.36
CCDC78-201ENST00000293889 LMO7DNF2Z398 122 aa17.31■□□□□ 0.36
CCDC78-201ENST00000293889 ARHGAP33O14559 1287 aa17.31■□□□□ 0.36
CCDC78-201ENST00000293889 ATP6V1G2O95670 118 aa17.31■□□□□ 0.36
CCDC78-201ENST00000293889 CATP04040 527 aaKnown RBP17.31■□□□□ 0.36
CCDC78-201ENST00000293889 ENO2P09104 434 aaPredicted RBP17.31■□□□□ 0.36
CCDC78-201ENST00000293889 CYP2A7P20853 494 aa17.31■□□□□ 0.36
CCDC78-201ENST00000293889 SERPINB4P48594 390 aa17.31■□□□□ 0.36
CCDC78-201ENST00000293889 RPIAP49247 311 aa17.31■□□□□ 0.36
CCDC78-201ENST00000293889 PCLAFQ15004 111 aa17.31■□□□□ 0.36
CCDC78-201ENST00000293889 PDK4Q16654 411 aa17.31■□□□□ 0.36
CCDC78-201ENST00000293889 IYDQ6PHW0 289 aa17.31■□□□□ 0.36
CCDC78-201ENST00000293889 IL27RAQ6UWB1 636 aa17.31■□□□□ 0.36
CCDC78-201ENST00000293889 ZYG11AQ6WRX3 759 aa17.31■□□□□ 0.36
CCDC78-201ENST00000293889 ALYREFQ86V81 257 aaKnown RBP17.31■□□□□ 0.36
CCDC78-201ENST00000293889 OR2I1PQ8NGU4 316 aa17.31■□□□□ 0.36
CCDC78-201ENST00000293889 MCOLN3Q8TDD5 553 aa17.31■□□□□ 0.36
CCDC78-201ENST00000293889 IL21RQ9HBE5 538 aa17.31■□□□□ 0.36
CCDC78-201ENST00000293889 RDH14Q9HBH5 336 aa17.31■□□□□ 0.36
CCDC78-201ENST00000293889 KLHL14Q9P2G3 628 aa17.31■□□□□ 0.36
CCDC78-201ENST00000293889 ZNF624Q9P2J8 865 aaPredicted RBP17.31■□□□□ 0.36
CCDC78-201ENST00000293889 COPG2Q9UBF2 871 aa17.31■□□□□ 0.36
CCDC78-201ENST00000293889 ARHGEF17Q96PE2 2063 aaPredicted RBP17.3■□□□□ 0.36
CCDC78-201ENST00000293889 PIEZO1Q92508 2521 aa17.3■□□□□ 0.36
CCDC78-201ENST00000293889 A0A1B0GTQ1 180 aa17.3■□□□□ 0.36
CCDC78-201ENST00000293889 NCF1BA6NI72 391 aaPredicted RBP17.3■□□□□ 0.36
CCDC78-201ENST00000293889 NCF1CA8MVU1 366 aaPredicted RBP17.3■□□□□ 0.36
CCDC78-201ENST00000293889 SUPT3HB4E1H0 165 aa17.3■□□□□ 0.36
CCDC78-201ENST00000293889 DLX3O60479 287 aa17.3■□□□□ 0.36
CCDC78-201ENST00000293889 SUPT3HO75486 399 aa17.3■□□□□ 0.36
CCDC78-201ENST00000293889 ATP5HO75947 161 aa17.3■□□□□ 0.36
CCDC78-201ENST00000293889 GUCA1CO95843 209 aa17.3■□□□□ 0.36
CCDC78-201ENST00000293889 SYPP08247 313 aa17.3■□□□□ 0.36
CCDC78-201ENST00000293889 MYL2P10916 166 aa17.3■□□□□ 0.36
CCDC78-201ENST00000293889 MTHFD1P11586 935 aaKnown RBP17.3■□□□□ 0.36
CCDC78-201ENST00000293889 NCF1P14598 390 aaPredicted RBP17.3■□□□□ 0.36
CCDC78-201ENST00000293889 KCNA4P22459 653 aa17.3■□□□□ 0.36
CCDC78-201ENST00000293889 MAP4P27816 1152 aaKnown RBP17.3■□□□□ 0.36
CCDC78-201ENST00000293889 MBOAT1Q6ZNC8 495 aa17.3■□□□□ 0.36
CCDC78-201ENST00000293889 SFTPA2Q8IWL1 248 aa17.3■□□□□ 0.36
CCDC78-201ENST00000293889 SDR16C5Q8N3Y7 309 aa17.3■□□□□ 0.36
CCDC78-201ENST00000293889 SLC25A45Q8N413 288 aa17.3■□□□□ 0.36
CCDC78-201ENST00000293889 FBXO15Q8NCQ5 510 aaPredicted RBP17.3■□□□□ 0.36
CCDC78-201ENST00000293889 OR5K2Q8NHB8 316 aa17.3■□□□□ 0.36
CCDC78-201ENST00000293889 PATE1Q8WXA2 126 aa17.3■□□□□ 0.36
CCDC78-201ENST00000293889 FERD3LQ96RJ6 166 aa17.3■□□□□ 0.36
CCDC78-201ENST00000293889 MECRQ9BV79 373 aa17.3■□□□□ 0.36
CCDC78-201ENST00000293889 TRIM54Q9BYV2 358 aa17.3■□□□□ 0.36
CCDC78-201ENST00000293889 GAREM1Q9H706 876 aa17.3■□□□□ 0.36
CCDC78-201ENST00000293889 CD274Q9NZQ7 290 aa17.3■□□□□ 0.36
CCDC78-201ENST00000293889 CIDEBQ9UHD4 219 aa17.3■□□□□ 0.36
CCDC78-201ENST00000293889 DOLKQ9UPQ8 538 aa17.3■□□□□ 0.36
CCDC78-201ENST00000293889 ANKRD12Q6UB98 2062 aa17.3■□□□□ 0.36
CCDC78-201ENST00000293889 DMXL1Q9Y485 3027 aa17.3■□□□□ 0.36
CCDC78-201ENST00000293889 PRAMEF33A0A0G2JMD5 474 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 WDR91A4D1P6 747 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 FFAR2O15552 330 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 GDF9O60383 454 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 DFNA5O60443 496 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 SMIM24O75264 130 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 BPGMP07738 259 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 TPBGLP0DKB5 382 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 ALDH3A1P30838 453 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 DEFB133Q30KQ1 61 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 C10orf107Q8IVU9 208 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 KIAA2013Q8IYS2 634 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 TBC1D21Q8IYX1 336 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 FITM2Q8N6M3 262 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 ZDHHC1Q8WTX9 485 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 PITPNM3Q9BZ71 974 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 TRIT1Q9H3H1 467 aaKnown RBP17.29■□□□□ 0.36
CCDC78-201ENST00000293889 ARL15Q9NXU5 204 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 NUDT4Q9NZJ9 180 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 MID2Q9UJV3 735 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 CSNK1G3Q9Y6M4 447 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 CFAP54Q96N23 3096 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 CABIN1Q9Y6J0 2220 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 A8MT66 165 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 B4DGG1 531 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 KLK8O60259 260 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 RPN2P04844 631 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 ANXA6P08133 673 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 HIST1H2AGP0C0S8 130 aaPredicted RBP17.29■□□□□ 0.36
CCDC78-201ENST00000293889 GFAPP14136 432 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 HIST1H2ADP20671 130 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 ATP5F1P24539 256 aaPredicted RBP17.29■□□□□ 0.36
CCDC78-201ENST00000293889 EPHA8P29322 1005 aaPredicted RBP17.29■□□□□ 0.36
CCDC78-201ENST00000293889 SLC19A1P41440 591 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 PRKG2Q13237 762 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 DCUN1D3Q8IWE4 304 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 NAGSQ8N159 534 aa17.29■□□□□ 0.36
CCDC78-201ENST00000293889 PHF21BQ96EK2 531 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms