RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 CSNK1EP49674 416 aaKnown RBP12.59□□□□□ -0.39
LSM8-201ENST00000249299 LCP2Q13094 533 aa12.59□□□□□ -0.39
LSM8-201ENST00000249299 SIM2Q14190 667 aaPredicted RBP12.59□□□□□ -0.39
LSM8-201ENST00000249299 RPE65Q16518 533 aa12.59□□□□□ -0.39
LSM8-201ENST00000249299 CYP2A13Q16696 494 aa12.59□□□□□ -0.39
LSM8-201ENST00000249299 UNC50Q53HI1 259 aa12.59□□□□□ -0.39
LSM8-201ENST00000249299 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.59□□□□□ -0.39
LSM8-201ENST00000249299 IYDQ6PHW0 289 aa12.59□□□□□ -0.39
LSM8-201ENST00000249299 CRLF3Q8IUI8 442 aa12.59□□□□□ -0.39
LSM8-201ENST00000249299 OR56A3Q8NH54 315 aa12.59□□□□□ -0.39
LSM8-201ENST00000249299 ZNF483Q8TF39 744 aaPredicted RBP12.59□□□□□ -0.39
LSM8-201ENST00000249299 STON2Q8WXE9 905 aa12.59□□□□□ -0.39
LSM8-201ENST00000249299 C12orf66Q96MD2 445 aa12.59□□□□□ -0.39
LSM8-201ENST00000249299 INSM2Q96T92 566 aaPredicted RBP12.59□□□□□ -0.39
LSM8-201ENST00000249299 ILKAPQ9H0C8 392 aaPredicted RBP12.59□□□□□ -0.39
LSM8-201ENST00000249299 PCBD2Q9H0N5 130 aa12.59□□□□□ -0.39
LSM8-201ENST00000249299 SLC32A1Q9H598 525 aa12.59□□□□□ -0.39
LSM8-201ENST00000249299 KIR3DX1Q9H7L2 352 aa12.59□□□□□ -0.39
LSM8-201ENST00000249299 POT1Q9NUX5 634 aa12.59□□□□□ -0.39
LSM8-201ENST00000249299 UTP6Q9NYH9 597 aaKnown RBP12.59□□□□□ -0.39
LSM8-201ENST00000249299 WWOXQ9NZC7 414 aa12.59□□□□□ -0.39
LSM8-201ENST00000249299 FAM8A1Q9UBU6 413 aa12.59□□□□□ -0.39
LSM8-201ENST00000249299 KLF15Q9UIH9 416 aa12.59□□□□□ -0.39
LSM8-201ENST00000249299 RAP2CQ9Y3L5 183 aa12.59□□□□□ -0.39
LSM8-201ENST00000249299 ST14Q9Y5Y6 855 aa12.59□□□□□ -0.39
LSM8-201ENST00000249299 FAM221BA6H8Z2 402 aa12.58□□□□□ -0.4
LSM8-201ENST00000249299 E2F3O00716 465 aa12.58□□□□□ -0.4
LSM8-201ENST00000249299 UGDHO60701 494 aa12.58□□□□□ -0.4
LSM8-201ENST00000249299 SUPT7LO94864 414 aa12.58□□□□□ -0.4
LSM8-201ENST00000249299 RPL10P27635 214 aaKnown RBP12.58□□□□□ -0.4
LSM8-201ENST00000249299 EEF1DP29692 281 aaKnown RBP12.58□□□□□ -0.4
LSM8-201ENST00000249299 PKNOX1P55347 436 aa12.58□□□□□ -0.4
LSM8-201ENST00000249299 CLCQ05315 142 aa12.58□□□□□ -0.4
LSM8-201ENST00000249299 CLCA4Q14CN2 919 aa12.58□□□□□ -0.4
LSM8-201ENST00000249299 PRRT3Q5FWE3 981 aa12.58□□□□□ -0.4
LSM8-201ENST00000249299 ARL13AQ5H913 290 aaPredicted RBP12.58□□□□□ -0.4
LSM8-201ENST00000249299 TAF8Q7Z7C8 310 aa12.58□□□□□ -0.4
LSM8-201ENST00000249299 AFAP1L2Q8N4X5 818 aa12.58□□□□□ -0.4
LSM8-201ENST00000249299 CCNYL1Q8N7R7 359 aa12.58□□□□□ -0.4
LSM8-201ENST00000249299 CFAP61Q8NHU2 1237 aa12.58□□□□□ -0.4
LSM8-201ENST00000249299 SETD7Q8WTS6 366 aaKnown RBP12.58□□□□□ -0.4
LSM8-201ENST00000249299 FAR2Q96K12 515 aa12.58□□□□□ -0.4
LSM8-201ENST00000249299 ZNF382Q96SR6 550 aa12.58□□□□□ -0.4
LSM8-201ENST00000249299 PKP4Q99569 1192 aa12.58□□□□□ -0.4
LSM8-201ENST00000249299 ELF4Q99607 663 aaPredicted RBP12.58□□□□□ -0.4
LSM8-201ENST00000249299 MIPEPQ99797 713 aa12.58□□□□□ -0.4
LSM8-201ENST00000249299 CCT7Q99832 543 aa12.58□□□□□ -0.4
LSM8-201ENST00000249299 LRRC61Q9BV99 259 aa12.58□□□□□ -0.4
LSM8-201ENST00000249299 GSTO2Q9H4Y5 243 aa12.58□□□□□ -0.4
LSM8-201ENST00000249299 UCK1Q9HA47 277 aa12.58□□□□□ -0.4
LSM8-201ENST00000249299 C11orf16Q9NQ32 467 aa12.58□□□□□ -0.4
LSM8-201ENST00000249299 GPRC5BQ9NZH0 403 aa12.58□□□□□ -0.4
LSM8-201ENST00000249299 TAAR2Q9P1P5 351 aa12.58□□□□□ -0.4
LSM8-201ENST00000249299 STOX2Q9P2F5 926 aaPredicted RBP12.58□□□□□ -0.4
LSM8-201ENST00000249299 OPTCQ9UBM4 332 aa12.58□□□□□ -0.4
LSM8-201ENST00000249299 PCTPQ9UKL6 214 aa12.58□□□□□ -0.4
LSM8-201ENST00000249299 WDR37Q9Y2I8 494 aa12.58□□□□□ -0.4
LSM8-201ENST00000249299 NCF1BA6NI72 391 aaPredicted RBP12.57□□□□□ -0.4
LSM8-201ENST00000249299 NCF1CA8MVU1 366 aaPredicted RBP12.57□□□□□ -0.4
LSM8-201ENST00000249299 TAPBPO15533 448 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 AQP9O43315 295 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 PIAS2O75928 621 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 HSPA4LO95757 839 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 GUCA1CO95843 209 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 SLC16A8O95907 504 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 OTCP00480 354 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 TROVE2P10155 538 aaKnown RBP eCLIP12.57□□□□□ -0.4
LSM8-201ENST00000249299 NCF1P14598 390 aaPredicted RBP12.57□□□□□ -0.4
LSM8-201ENST00000249299 EPB42P16452 691 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 AK4P27144 223 aaPredicted RBP12.57□□□□□ -0.4
LSM8-201ENST00000249299 IMPA1P29218 277 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 GABPB1Q06547 395 aaPredicted RBP12.57□□□□□ -0.4
LSM8-201ENST00000249299 CDC16Q13042 620 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 SRSF5Q13243 272 aaKnown RBP12.57□□□□□ -0.4
LSM8-201ENST00000249299 KRT33BQ14525 404 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 ZNF423Q2M1K9 1284 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 TTC19Q6DKK2 380 aaPredicted RBP12.57□□□□□ -0.4
LSM8-201ENST00000249299 CAPN13Q6MZZ7 669 aaPredicted RBP12.57□□□□□ -0.4
LSM8-201ENST00000249299 SLC23A3Q6PIS1 610 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 OGFOD3Q6PK18 319 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 SLC30A9Q6PML9 568 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 AGTRAPQ6RW13 159 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 ARMCX6Q7L4S7 300 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 CPLX4Q7Z7G2 160 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 SLC9B2Q86UD5 537 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 WDR75Q8IWA0 830 aaKnown RBP12.57□□□□□ -0.4
LSM8-201ENST00000249299 LRRC34Q8IZ02 419 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 SFRP1Q8N474 314 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 PIWIL2Q8TC59 973 aaKnown RBP12.57□□□□□ -0.4
LSM8-201ENST00000249299 ZNF480Q8WV37 535 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 EXT2Q93063 718 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 FERD3LQ96RJ6 166 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 NTMT1Q9BV86 223 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 SGPP1Q9BX95 441 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 TWSG1Q9GZX9 223 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 IRF2BPLQ9H1B7 796 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 STN1Q9H668 368 aaKnown RBP12.57□□□□□ -0.4
LSM8-201ENST00000249299 PRDM8Q9NQV8 689 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 OR6C2Q9NZP2 312 aa12.57□□□□□ -0.4
LSM8-201ENST00000249299 VTI1BQ9UEU0 232 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms