RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 C1orf94Q6P1W5 598 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 CMIPQ8IY22 773 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 SPERTQ8NA61 448 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 PLEKHO2Q8TD55 490 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 SLC35G5Q96KT7 338 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 HSPA12BQ96MM6 686 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 TBCBQ99426 244 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 TRIM9Q9C026 710 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 CARS2Q9HA77 564 aaKnown RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 TM9SF3Q9HD45 589 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 PPP4R1LQ9P1A2 415 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 TNFRSF10DQ9UBN6 386 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 SLC30A4O14863 429 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 OR1F1O43749 312 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 FOXD2O60548 495 aaPredicted RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 KCNK5O95279 499 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 CD46P15529 392 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 GSSP48637 474 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 CDONQ4KMG0 1287 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 POLNQ7Z5Q5 900 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 KLF6Q99612 283 aaPredicted RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 PELOQ9BRX2 385 aaKnown RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 GPATCH8Q9UKJ3 1502 aaKnown RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 NPC1O15118 1278 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 ADH1BP00325 375 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 MAPTP10636 758 aaKnown RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 ALADP13716 330 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 TRIM23P36406 574 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 FLT3LGP49771 235 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 PTPN11Q06124 597 aaPredicted RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 TATDN3Q17R31 274 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 VMACQ2NL98 169 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 GSTCDQ8NEC7 633 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 C16orf78Q8WTQ4 265 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 MAP4K1Q92918 833 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 MKL1Q969V6 931 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 DECR2Q9NUI1 292 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 TAS2R7Q9NYW3 318 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 CPDO75976 1380 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 NOS1APO75052 506 aaPredicted RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 AOC2O75106 756 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 AIMP2Q13155 320 aaKnown RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 NFATC2Q13469 925 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 CXCL17Q6UXB2 119 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 UBE2Q1Q7Z7E8 422 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 CMTM3Q96MX0 182 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 KLHL5Q96PQ7 755 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 PDP2Q9P2J9 529 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 LSM1O15116 133 aaKnown RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 B4GALT2O60909 372 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 ITPKAP23677 461 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 SPAM1P38567 509 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 GRM5P41594 1212 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 HOXA4Q00056 320 aaPredicted RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 AGAP7PQ5VUJ5 663 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 AGAP6Q5VW22 663 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 DNAJC14Q6Y2X3 702 aaPredicted RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 SCUBE1Q8IWY4 988 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 CPEB3Q8NE35 698 aaKnown RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 ING5Q8WYH8 240 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 CIDECQ96AQ7 238 aaPredicted RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 ATP6V1G3Q96LB4 118 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 AGAP4Q96P64 663 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 TP53TG5Q9Y2B4 290 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 TEX51A0A1B0GUA7 166 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 C17orf113A0A1B0GUU1 675 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 E9PI62 339 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 OAZ2O95190 189 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 THBS3P49746 956 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 MAPK12P53778 367 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 HIPK1Q86Z02 1210 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 DEFB106AQ8N104 65 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 MINDY2Q8NBR6 621 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 TPCN2Q8NHX9 752 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 LRIG1Q96JA1 1093 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 OR1F2PQ96R84 312 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 B3GNT4Q9C0J1 378 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 DDX20Q9UHI6 824 aaKnown RBP3.38□□□□□ -1.87
NEB-201ENST00000172853 DISC1C4P0D8 188 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 TRBC1P01850 177 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 GNB3P16520 340 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 FBLP22087 321 aaKnown RBP3.38□□□□□ -1.87
NEB-201ENST00000172853 CDKN1CP49918 316 aaPredicted RBP3.38□□□□□ -1.87
NEB-201ENST00000172853 CLCQ05315 142 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 SLC18A2Q05940 514 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 BRMS1LQ5PSV4 323 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 GDPD4Q6W3E5 623 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 ADGRD2Q7Z7M1 963 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 ZADH2Q8N4Q0 377 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 OR4N2Q8NGD1 307 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 OR5B12Q96R08 314 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 FAM86C1Q9NVL1 165 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 TAS2R14Q9NYV8 317 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 RGS12O14924 1447 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 CHRNA1P02708 482 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 UGT2B4P06133 528 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 FOLR3P41439 243 aa3.38□□□□□ -1.87
NEB-201ENST00000172853 AGFG1P52594 562 aaKnown RBP3.38□□□□□ -1.87
NEB-201ENST00000172853 RPL6Q02878 288 aaKnown RBP3.38□□□□□ -1.87
NEB-201ENST00000172853 RALGPS1Q5JS13 557 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms