RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 SHBQ15464 509 aa17.03■□□□□ 0.32
PHGDH-230ENST00000641927 CCSMST1Q4G0I0 132 aa17.03■□□□□ 0.32
PHGDH-230ENST00000641927 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.03■□□□□ 0.32
PHGDH-230ENST00000641927 TRIM48Q8IWZ4 208 aa17.03■□□□□ 0.32
PHGDH-230ENST00000641927 OR2I1PQ8NGU4 316 aa17.03■□□□□ 0.32
PHGDH-230ENST00000641927 OR5K2Q8NHB8 316 aa17.03■□□□□ 0.32
PHGDH-230ENST00000641927 RDH11Q8TC12 318 aa17.03■□□□□ 0.32
PHGDH-230ENST00000641927 HGH1Q9BTY7 390 aa17.03■□□□□ 0.32
PHGDH-230ENST00000641927 MECRQ9BV79 373 aa17.03■□□□□ 0.32
PHGDH-230ENST00000641927 SIRPGQ9P1W8 387 aa17.03■□□□□ 0.32
PHGDH-230ENST00000641927 HEBP2Q9Y5Z4 205 aa17.03■□□□□ 0.32
PHGDH-230ENST00000641927 CACNA1EQ15878 2313 aa17.02■□□□□ 0.32
PHGDH-230ENST00000641927 TARM1B6A8C7 271 aa17.02■□□□□ 0.32
PHGDH-230ENST00000641927 G3V2L1 256 aa17.02■□□□□ 0.32
PHGDH-230ENST00000641927 DFNA5O60443 496 aa17.02■□□□□ 0.32
PHGDH-230ENST00000641927 RETP07949 1114 aa17.02■□□□□ 0.32
PHGDH-230ENST00000641927 EPHA8P29322 1005 aaPredicted RBP17.02■□□□□ 0.32
PHGDH-230ENST00000641927 SERPINB4P48594 390 aa17.02■□□□□ 0.32
PHGDH-230ENST00000641927 PFKFB4Q16877 469 aa17.02■□□□□ 0.32
PHGDH-230ENST00000641927 IYDQ6PHW0 289 aa17.02■□□□□ 0.32
PHGDH-230ENST00000641927 ZYG11AQ6WRX3 759 aa17.02■□□□□ 0.32
PHGDH-230ENST00000641927 MBOAT1Q6ZNC8 495 aa17.02■□□□□ 0.32
PHGDH-230ENST00000641927 GATAD2AQ86YP4 633 aa17.02■□□□□ 0.32
PHGDH-230ENST00000641927 DCUN1D3Q8IWE4 304 aa17.02■□□□□ 0.32
PHGDH-230ENST00000641927 SFTPA2Q8IWL1 248 aa17.02■□□□□ 0.32
PHGDH-230ENST00000641927 SDR16C5Q8N3Y7 309 aa17.02■□□□□ 0.32
PHGDH-230ENST00000641927 FBXO39Q8N4B4 442 aa17.02■□□□□ 0.32
PHGDH-230ENST00000641927 SUMF1Q8NBK3 374 aa17.02■□□□□ 0.32
PHGDH-230ENST00000641927 PATE1Q8WXA2 126 aa17.02■□□□□ 0.32
PHGDH-230ENST00000641927 PHF21BQ96EK2 531 aa17.02■□□□□ 0.32
PHGDH-230ENST00000641927 NUDT4Q9NZJ9 180 aa17.02■□□□□ 0.32
PHGDH-230ENST00000641927 ZNF624Q9P2J8 865 aaPredicted RBP17.02■□□□□ 0.32
PHGDH-230ENST00000641927 COLEC10Q9Y6Z7 277 aa17.02■□□□□ 0.32
PHGDH-230ENST00000641927 ADAMTS9Q9P2N4 1935 aa17.02■□□□□ 0.31
PHGDH-230ENST00000641927 MTHFD2P13995 350 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 ENGP17813 658 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 ATP5F1P24539 256 aaPredicted RBP17.01■□□□□ 0.31
PHGDH-230ENST00000641927 PCLAFQ15004 111 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 FBXO48Q5FWF7 155 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 C10orf107Q8IVU9 208 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 TBC1D21Q8IYX1 336 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 NAGSQ8N159 534 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 SLC25A45Q8N413 288 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 MVB12BQ9H7P6 319 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 RDH14Q9HBH5 336 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 KIR2DS5A0A0G2JLQ3 304 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 PRAMEF33A0A0G2JMD5 474 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 A0A0G2JNG1 304 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 OR5K4A6NMS3 321 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 A8MT66 165 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 KIR2DS3K7RE56 304 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 YKT6O15498 198 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 DLX3O60479 287 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 VIPP01282 170 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 BPGMP07738 259 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 ANXA5P08758 320 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 ALDH3A1P30838 453 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 CCT8P50990 548 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 AP1S2P56377 157 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 BIRC2Q13490 618 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 KIR2DS5Q14953 304 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 PLA2G2CQ5R387 149 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 RAB44Q7Z6P3 723 aaPredicted RBP17.01■□□□□ 0.31
PHGDH-230ENST00000641927 RASGRP3Q8IV61 690 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 NUDCD3Q8IVD9 361 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 PTGR2Q8N8N7 351 aaPredicted RBP17.01■□□□□ 0.31
PHGDH-230ENST00000641927 SLC37A2Q8TED4 501 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 SREK1Q8WXA9 508 aaKnown RBP17.01■□□□□ 0.31
PHGDH-230ENST00000641927 RAD51AP1Q96B01 352 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 PKP4Q99569 1192 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 NCKIPSDQ9NZQ3 722 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 PLAGL1Q9UM63 463 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 CSNK1G3Q9Y6M4 447 aa17.01■□□□□ 0.31
PHGDH-230ENST00000641927 CACNA1HO95180 2353 aa17■□□□□ 0.31
PHGDH-230ENST00000641927 IPO13O94829 963 aaKnown RBP17■□□□□ 0.31
PHGDH-230ENST00000641927 DHRS4L1P0CG22 281 aa17■□□□□ 0.31
PHGDH-230ENST00000641927 SLC19A1P41440 591 aa17■□□□□ 0.31
PHGDH-230ENST00000641927 GYS2P54840 703 aa17■□□□□ 0.31
PHGDH-230ENST00000641927 SLC22A9Q8IVM8 553 aa17■□□□□ 0.31
PHGDH-230ENST00000641927 OR9A1PQ8NGU1 263 aa17■□□□□ 0.31
PHGDH-230ENST00000641927 PPP1R14CQ8TAE6 165 aa17■□□□□ 0.31
PHGDH-230ENST00000641927 MAPK15Q8TD08 544 aa17■□□□□ 0.31
PHGDH-230ENST00000641927 CCDC126Q96EE4 140 aa17■□□□□ 0.31
PHGDH-230ENST00000641927 CCDC138Q96M89 665 aa17■□□□□ 0.31
PHGDH-230ENST00000641927 WWOXQ9NZC7 414 aa17■□□□□ 0.31
PHGDH-230ENST00000641927 NCDNQ9UBB6 729 aa17■□□□□ 0.31
PHGDH-230ENST00000641927 CPNE7Q9UBL6 633 aa17■□□□□ 0.31
PHGDH-230ENST00000641927 POLG2Q9UHN1 485 aa17■□□□□ 0.31
PHGDH-230ENST00000641927 TMCO1Q9UM00 188 aa17■□□□□ 0.31
PHGDH-230ENST00000641927 ANKRD12Q6UB98 2062 aa17■□□□□ 0.31
PHGDH-230ENST00000641927 BIRC5O15392 142 aa16.99■□□□□ 0.31
PHGDH-230ENST00000641927 NDUFS1P28331 727 aa16.99■□□□□ 0.31
PHGDH-230ENST00000641927 ALDH18A1P54886 795 aaKnown RBP16.99■□□□□ 0.31
PHGDH-230ENST00000641927 C18orf21Q32NC0 220 aaPredicted RBP16.99■□□□□ 0.31
PHGDH-230ENST00000641927 SLC9B2Q86UD5 537 aa16.99■□□□□ 0.31
PHGDH-230ENST00000641927 SFRP1Q8N474 314 aa16.99■□□□□ 0.31
PHGDH-230ENST00000641927 MINDY1Q8N5J2 469 aa16.99■□□□□ 0.31
PHGDH-230ENST00000641927 PDPRQ8NCN5 879 aa16.99■□□□□ 0.31
PHGDH-230ENST00000641927 FBXO15Q8NCQ5 510 aaPredicted RBP16.99■□□□□ 0.31
PHGDH-230ENST00000641927 SAP25Q8TEE9 199 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms