RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 METTL21CQ5VZV1 264 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 UGT3A1Q6NUS8 523 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 KIAA0907Q7Z7F0 614 aaPredicted RBP11.29□□□□□ -0.6
CLN6-217ENST00000636964 ASB16Q96NS5 453 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 CDC14AQ9UNH5 594 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 KNL1Q8NG31 2342 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 PRSS51A0A1B0GVH4 220 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 TRPC5OSA6NMA1 111 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 HEPACAM2A8MVW5 462 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 AIM2O14862 343 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 LINC01565O15544 149 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 CBFA2T3O75081 653 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 KCNC4Q03721 635 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 CLCQ05315 142 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 Q6ZVL8 140 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 HSD11B1LQ7Z5J1 315 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 IPCEF1Q8WWN9 437 aaPredicted RBP11.28□□□□□ -0.6
CLN6-217ENST00000636964 SH3KBP1Q96B97 665 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 CMTM5Q96DZ9 223 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 MCCC1Q96RQ3 725 aaPredicted RBP11.28□□□□□ -0.6
CLN6-217ENST00000636964 FBRSL1Q9HCM7 1045 aaKnown RBP11.28□□□□□ -0.6
CLN6-217ENST00000636964 C12orf4Q9NQ89 552 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 GNPTGQ9UJJ9 305 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 PCDHB1Q9Y5F3 818 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 C2orf16Q68DN1 1984 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 TRBV5-4A0A0C4DH59 114 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 SOBPA7XYQ1 873 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 WASH3PC4AMC7 463 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 CDK2AP1O14519 115 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 RNASEH2AO75792 299 aaKnown RBP11.28□□□□□ -0.6
CLN6-217ENST00000636964 ADH1CP00326 375 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 PRDX6P30041 224 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 SPINT3P49223 89 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 NRF1Q16656 503 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 ZNF648Q5T619 568 aaPredicted RBP11.28□□□□□ -0.6
CLN6-217ENST00000636964 CENPSQ8N2Z9 138 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 RNF148Q8N7C7 305 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 TOR1AIP2Q8NFQ8 470 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 ISOC1Q96CN7 298 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 ZBTB26Q9HCK0 441 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 PCDH12Q9NPG4 1184 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 FAM8A1Q9UBU6 413 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 IL36AQ9UHA7 158 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 FBXO10Q9UK96 956 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 BTRCQ9Y297 605 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 PPIL1Q9Y3C6 166 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 DNAJC15Q9Y5T4 150 aa11.28□□□□□ -0.6
CLN6-217ENST00000636964 COPG1Q9Y678 874 aaKnown RBP11.28□□□□□ -0.6
CLN6-217ENST00000636964 SYCE1LA8MT33 242 aa11.27□□□□□ -0.6
CLN6-217ENST00000636964 PRSS47A8MTI9 375 aa11.27□□□□□ -0.6
CLN6-217ENST00000636964 PLK4O00444 970 aa11.27□□□□□ -0.6
CLN6-217ENST00000636964 KPNA3O00505 521 aaPredicted RBP11.27□□□□□ -0.6
CLN6-217ENST00000636964 TIMP2P16035 220 aa11.27□□□□□ -0.6
CLN6-217ENST00000636964 PRKACAP17612 351 aa11.27□□□□□ -0.6
CLN6-217ENST00000636964 ARL1P40616 181 aaPredicted RBP11.27□□□□□ -0.6
CLN6-217ENST00000636964 HK2P52789 917 aa11.27□□□□□ -0.6
CLN6-217ENST00000636964 POLR2LP62875 67 aaKnown RBP11.27□□□□□ -0.6
CLN6-217ENST00000636964 GNA13Q14344 377 aa11.27□□□□□ -0.6
CLN6-217ENST00000636964 ZNF423Q2M1K9 1284 aa11.27□□□□□ -0.6
CLN6-217ENST00000636964 ANKS6Q68DC2 871 aa11.27□□□□□ -0.6
CLN6-217ENST00000636964 TANGO2Q6ICL3 276 aa11.27□□□□□ -0.6
CLN6-217ENST00000636964 SCIMPQ6UWF3 145 aa11.27□□□□□ -0.6
CLN6-217ENST00000636964 CYHR1Q6ZMK1 362 aa11.27□□□□□ -0.6
CLN6-217ENST00000636964 FRA10AC1Q70Z53 315 aa11.27□□□□□ -0.6
CLN6-217ENST00000636964 GPR180Q86V85 440 aa11.27□□□□□ -0.6
CLN6-217ENST00000636964 LURAP1LQ8IV03 231 aa11.27□□□□□ -0.6
CLN6-217ENST00000636964 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.27□□□□□ -0.6
CLN6-217ENST00000636964 CBARPQ8N350 705 aaPredicted RBP11.27□□□□□ -0.6
CLN6-217ENST00000636964 ZNF557Q8N988 423 aaPredicted RBP11.27□□□□□ -0.6
CLN6-217ENST00000636964 SMARCD2Q92925 531 aa11.27□□□□□ -0.6
CLN6-217ENST00000636964 C12orf43Q96C57 262 aaKnown RBP11.27□□□□□ -0.6
CLN6-217ENST00000636964 ELOVL2Q9NXB9 296 aa11.27□□□□□ -0.6
CLN6-217ENST00000636964 EPS15L1Q9UBC2 864 aa11.27□□□□□ -0.6
CLN6-217ENST00000636964 EIF2B4Q9UI10 523 aaKnown RBP11.27□□□□□ -0.6
CLN6-217ENST00000636964 SARDHQ9UL12 918 aa11.27□□□□□ -0.6
CLN6-217ENST00000636964 SLC8A2Q9UPR5 921 aa11.27□□□□□ -0.6
CLN6-217ENST00000636964 H3BNH8 94 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 STX16-NPEPL1H3BU86 382 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 ZW10O43264 779 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 XPAP23025 273 aaPredicted RBP11.27□□□□□ -0.61
CLN6-217ENST00000636964 B4GALNT1Q00973 533 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 CEACAM7Q14002 265 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 UGT3A2Q3SY77 523 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 XKR5Q6UX68 686 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 ZBTB46Q86UZ6 589 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 CARM1Q86X55 608 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 DDIASQ8IXT1 998 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 AFAP1L2Q8N4X5 818 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 TBC1D15Q8TC07 691 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 SAMD11Q96NU1 681 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 CDK15Q96Q40 435 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 TRMOQ9BU70 441 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 Q9H521 79 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 SFXN1Q9H9B4 322 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 TMPRSS11EQ9UL52 423 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 CORINQ9Y5Q5 1042 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 GPC6Q9Y625 555 aaPredicted RBP11.27□□□□□ -0.61
CLN6-217ENST00000636964 SCN8AQ9UQD0 1980 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 GPC4O75487 556 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 LINC00032P0C843 101 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms