RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 DENND6BQ8NEG7 585 aa9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 RNF217Q8TC41 542 aa9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 RHBDF1Q96CC6 855 aa9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 TOE1Q96GM8 510 aaKnown RBP9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 HIST1H2AHQ96KK5 128 aa9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 ASB2Q96Q27 587 aa9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 HIST1H2AJQ99878 128 aa9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 TMEM79Q9BSE2 394 aa9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 H2AFJQ9BTM1 129 aa9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 HGH1Q9BTY7 390 aa9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 TRIM54Q9BYV2 358 aa9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 TPSD1Q9BZJ3 242 aa9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 WWP1Q9H0M0 922 aa9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 CHRDQ9H2X0 955 aa9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 C6orf106Q9H6K1 298 aaPredicted RBP9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 PARVBQ9HBI1 364 aa9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 ZBTB26Q9HCK0 441 aa9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 TNFRSF12AQ9NP84 129 aa9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 MID1IP1Q9NPA3 183 aa9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 SEMA4BQ9NPR2 832 aaPredicted RBP9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 TM7SF3Q9NS93 570 aa9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 DNAJC28Q9NX36 388 aa9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 ARL15Q9NXU5 204 aa9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 WSB2Q9NYS7 404 aaPredicted RBP9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 WWOXQ9NZC7 414 aa9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 HEY2Q9UBP5 337 aa9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 SLC23A2Q9UGH3 650 aa9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 ZNHIT2Q9UHR6 403 aa9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 MUTYHQ9UIF7 546 aa9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 PTBP2Q9UKA9 531 aaKnown RBP9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 PCTPQ9UKL6 214 aa9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 FIS1Q9Y3D6 152 aa9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 TNPO3Q9Y5L0 923 aaKnown RBP9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 DNMT3AQ9Y6K1 912 aaPredicted RBP9.7□□□□□ -0.86
SOX2-OT-244ENST00000627738 PABPN1LA6NDY0 278 aaKnown RBP9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 POM121BA6NF01 834 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 ARHGEF33A8MVX0 844 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 C10orf142B7Z368 130 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 MATN2O00339 956 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 E2F3O00716 465 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 KMOO15229 486 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 HDAC3O15379 428 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 LATO43561 262 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 DIAPH2O60879 1101 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 PSIP1O75475 530 aaKnown RBP9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 DCTN3O75935 186 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 FSBPO95073 299 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 FUCA1P04066 466 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 CEACAM5P06731 702 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 SERPINB3P29508 390 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 CD6P30203 668 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 BDKRB1P46663 353 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 HSPA7P48741 367 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 HK2P52789 917 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 KIAA1024LP59773 190 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 CDKL1Q00532 357 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 PLOD1Q02809 727 aaPredicted RBP9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 DMTNQ08495 405 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 LCP2Q13094 533 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 PDCD2Q16342 344 aaPredicted RBP9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 RBBP7Q16576 425 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 SLC9B1Q4ZJI4 515 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 CDKL4Q5MAI5 379 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 FAM219BQ5XKK7 198 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 KIAA0895LQ68EN5 471 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 EPGNQ6UW88 154 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 MTDHQ86UE4 582 aaKnown RBP9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 ALYREFQ86V81 257 aaKnown RBP9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 AFAP1L2Q8N4X5 818 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 OXR1Q8N573 874 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 FITM2Q8N6M3 262 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 FRMD1Q8N878 549 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 PJA1Q8NG27 643 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 OR56A4Q8NGH8 313 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 MAPK15Q8TD08 544 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 MCOLN3Q8TDD5 553 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 AGAP11Q8TF27 550 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 UBTD2Q8WUN7 234 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 RLN3Q8WXF3 142 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 CLDN23Q96B33 292 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 FAR2Q96K12 515 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 BMFQ96LC9 184 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 RILPQ96NA2 401 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 FOPNLQ96NB1 174 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 GPR174Q9BXC1 333 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 NUF2Q9BZD4 464 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 MYLK2Q9H1R3 596 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 RMI1Q9H9A7 625 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 EBF2Q9HAK2 575 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 MRPL40Q9NQ50 206 aaKnown RBP9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 VTI1BQ9UEU0 232 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 MOSPD1Q9UJG1 213 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 SLC17A4Q9Y2C5 497 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 TRAF6Q9Y4K3 522 aa9.69□□□□□ -0.86
SOX2-OT-244ENST00000627738 IGHV1OR15-9A0A0B4J2B8 117 aa9.68□□□□□ -0.86
SOX2-OT-244ENST00000627738 A0A1B0GTL3 188 aa9.68□□□□□ -0.86
SOX2-OT-244ENST00000627738 KRT87PA6NCN2 255 aa9.68□□□□□ -0.86
SOX2-OT-244ENST00000627738 SLCO1B7G3V0H7 640 aa9.68□□□□□ -0.86
SOX2-OT-244ENST00000627738 H0Y8X5 98 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms