RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 TCTN2Q96GX1 697 aa17.38■□□□□ 0.37
CHMP2A-208ENST00000601220 GBP5Q96PP8 586 aa17.38■□□□□ 0.37
CHMP2A-208ENST00000601220 MFRPQ9BY79 579 aa17.38■□□□□ 0.37
CHMP2A-208ENST00000601220 LRRC4CQ9HCJ2 640 aa17.38■□□□□ 0.37
CHMP2A-208ENST00000601220 SMARCAL1Q9NZC9 954 aa17.38■□□□□ 0.37
CHMP2A-208ENST00000601220 TCP11X1B4DZS4 312 aa17.37■□□□□ 0.37
CHMP2A-208ENST00000601220 MAP3K7O43318 606 aa17.37■□□□□ 0.37
CHMP2A-208ENST00000601220 CNOT3O75175 753 aaKnown RBP17.37■□□□□ 0.37
CHMP2A-208ENST00000601220 CHRM5P08912 532 aaPredicted RBP17.37■□□□□ 0.37
CHMP2A-208ENST00000601220 PEBP1P30086 187 aaKnown RBP17.37■□□□□ 0.37
CHMP2A-208ENST00000601220 CETN2P41208 172 aa17.37■□□□□ 0.37
CHMP2A-208ENST00000601220 RHBDD2Q6NTF9 364 aa17.37■□□□□ 0.37
CHMP2A-208ENST00000601220 ZNF449Q6P9G9 518 aa17.37■□□□□ 0.37
CHMP2A-208ENST00000601220 NAPRTQ6XQN6 538 aa17.37■□□□□ 0.37
CHMP2A-208ENST00000601220 TMTC1Q8IUR5 882 aa17.37■□□□□ 0.37
CHMP2A-208ENST00000601220 TMEM151BQ8IW70 566 aa17.37■□□□□ 0.37
CHMP2A-208ENST00000601220 TBC1D21Q8IYX1 336 aa17.37■□□□□ 0.37
CHMP2A-208ENST00000601220 DNAJC22Q8N4W6 341 aa17.37■□□□□ 0.37
CHMP2A-208ENST00000601220 ACRBPQ8NEB7 543 aa17.37■□□□□ 0.37
CHMP2A-208ENST00000601220 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.37■□□□□ 0.372e-6■■■■■ 27.5
CHMP2A-208ENST00000601220 PNPLA2Q96AD5 504 aa17.37■□□□□ 0.37
CHMP2A-208ENST00000601220 LUZP4Q9P127 313 aa17.37■□□□□ 0.37
CHMP2A-208ENST00000601220 TCRBV7S2A1N4TA0A589 114 aa17.36■□□□□ 0.37
CHMP2A-208ENST00000601220 CCDC162PA2VCL2 907 aa17.36■□□□□ 0.37
CHMP2A-208ENST00000601220 OR2B3O76000 313 aa17.36■□□□□ 0.37
CHMP2A-208ENST00000601220 AGFG2O95081 481 aa17.36■□□□□ 0.37
CHMP2A-208ENST00000601220 AGXTP21549 392 aa17.36■□□□□ 0.37
CHMP2A-208ENST00000601220 SHMT2P34897 504 aa17.36■□□□□ 0.37
CHMP2A-208ENST00000601220 GCGRP47871 477 aa17.36■□□□□ 0.37
CHMP2A-208ENST00000601220 RRADP55042 308 aa17.36■□□□□ 0.37
CHMP2A-208ENST00000601220 NAP1L1P55209 391 aaKnown RBP17.36■□□□□ 0.37
CHMP2A-208ENST00000601220 SSPNQ14714 243 aa17.36■□□□□ 0.37
CHMP2A-208ENST00000601220 DEFB110Q30KQ9 67 aa17.36■□□□□ 0.37
CHMP2A-208ENST00000601220 C4orf17Q53FE4 359 aa17.36■□□□□ 0.37
CHMP2A-208ENST00000601220 MRPL14Q6P1L8 145 aaKnown RBP17.36■□□□□ 0.37
CHMP2A-208ENST00000601220 MRGPREQ86SM8 312 aa17.36■□□□□ 0.37
CHMP2A-208ENST00000601220 TTC13Q8NBP0 860 aa17.36■□□□□ 0.37
CHMP2A-208ENST00000601220 OR13J1Q8NGT2 312 aa17.36■□□□□ 0.37
CHMP2A-208ENST00000601220 OR5K2Q8NHB8 316 aa17.36■□□□□ 0.37
CHMP2A-208ENST00000601220 ELMO1Q92556 727 aa17.36■□□□□ 0.37
CHMP2A-208ENST00000601220 LRRC45Q96CN5 670 aa17.36■□□□□ 0.37
CHMP2A-208ENST00000601220 TMEM121Q9BTD3 319 aa17.36■□□□□ 0.37
CHMP2A-208ENST00000601220 GPR83Q9NYM4 423 aa17.36■□□□□ 0.37
CHMP2A-208ENST00000601220 OR6C2Q9NZP2 312 aa17.36■□□□□ 0.37
CHMP2A-208ENST00000601220 POLG2Q9UHN1 485 aa17.36■□□□□ 0.37
CHMP2A-208ENST00000601220 ASF1AQ9Y294 204 aa17.36■□□□□ 0.37
CHMP2A-208ENST00000601220 AP1M2Q9Y6Q5 423 aa17.36■□□□□ 0.37
CHMP2A-208ENST00000601220 SHANK1Q9Y566 2161 aa17.36■□□□□ 0.37
CHMP2A-208ENST00000601220 A0A0J9YY10 115 aa17.35■□□□□ 0.37
CHMP2A-208ENST00000601220 CCDC78A2IDD5 438 aa17.35■□□□□ 0.37
CHMP2A-208ENST00000601220 C9J4A7 227 aa17.35■□□□□ 0.37
CHMP2A-208ENST00000601220 PSMD3O43242 534 aa17.35■□□□□ 0.37
CHMP2A-208ENST00000601220 OR1I1O60431 355 aa17.35■□□□□ 0.37
CHMP2A-208ENST00000601220 MSNP26038 577 aaKnown RBP17.35■□□□□ 0.37
CHMP2A-208ENST00000601220 OTX2P32243 289 aa17.35■□□□□ 0.37
CHMP2A-208ENST00000601220 FOXL2P58012 376 aa17.35■□□□□ 0.37
CHMP2A-208ENST00000601220 RAPSNQ13702 412 aa17.35■□□□□ 0.37
CHMP2A-208ENST00000601220 BRD3Q15059 726 aa17.35■□□□□ 0.37
CHMP2A-208ENST00000601220 P3H1Q32P28 736 aa17.35■□□□□ 0.37
CHMP2A-208ENST00000601220 PLEKHN1Q494U1 663 aaPredicted RBP17.35■□□□□ 0.37
CHMP2A-208ENST00000601220 CCDC38Q502W7 563 aa17.35■□□□□ 0.37
CHMP2A-208ENST00000601220 C1orf189Q5VU69 101 aa17.35■□□□□ 0.37
CHMP2A-208ENST00000601220 RAB43Q86YS6 212 aa17.35■□□□□ 0.37
CHMP2A-208ENST00000601220 LURAP1LQ8IV03 231 aa17.35■□□□□ 0.37
CHMP2A-208ENST00000601220 GPR135Q8IZ08 494 aa17.35■□□□□ 0.37
CHMP2A-208ENST00000601220 C19orf60Q96EN9 201 aa17.35■□□□□ 0.37
CHMP2A-208ENST00000601220 MENTQ9BUN1 341 aa17.35■□□□□ 0.37
CHMP2A-208ENST00000601220 SLC7A5P2Q9GIP4 190 aa17.35■□□□□ 0.37
CHMP2A-208ENST00000601220 SLC22A11Q9NSA0 550 aa17.35■□□□□ 0.37
CHMP2A-208ENST00000601220 C5AR2Q9P296 337 aa17.35■□□□□ 0.37
CHMP2A-208ENST00000601220 PLEKHB1Q9UF11 243 aaPredicted RBP17.35■□□□□ 0.37
CHMP2A-208ENST00000601220 AMFRQ9UKV5 643 aa17.35■□□□□ 0.37
CHMP2A-208ENST00000601220 PACSIN2Q9UNF0 486 aaPredicted RBP17.35■□□□□ 0.37
CHMP2A-208ENST00000601220 CDYLQ9Y232 598 aa17.35■□□□□ 0.37
CHMP2A-208ENST00000601220 PADI2Q9Y2J8 665 aa17.35■□□□□ 0.37
CHMP2A-208ENST00000601220 SEC16AO15027 2179 aa17.35■□□□□ 0.37
CHMP2A-208ENST00000601220 A0A0U1RQJ8 604 aa17.34■□□□□ 0.37
CHMP2A-208ENST00000601220 QSOX1O00391 747 aa17.34■□□□□ 0.37
CHMP2A-208ENST00000601220 FTH1P02794 183 aa17.34■□□□□ 0.37
CHMP2A-208ENST00000601220 UMODP07911 640 aa17.34■□□□□ 0.37
CHMP2A-208ENST00000601220 ZNF75DP51815 510 aa17.34■□□□□ 0.37
CHMP2A-208ENST00000601220 DCDP81605 110 aaKnown RBP17.34■□□□□ 0.37
CHMP2A-208ENST00000601220 MRPL49Q13405 166 aaKnown RBP17.34■□□□□ 0.37
CHMP2A-208ENST00000601220 SLC5A12Q1EHB4 618 aa17.34■□□□□ 0.37
CHMP2A-208ENST00000601220 CRB2Q5IJ48 1285 aa17.34■□□□□ 0.37
CHMP2A-208ENST00000601220 VWA5B1Q5TIE3 1220 aa17.34■□□□□ 0.37
CHMP2A-208ENST00000601220 MLIPQ5VWP3 458 aa17.34■□□□□ 0.37
CHMP2A-208ENST00000601220 TAB3Q8N5C8 712 aaPredicted RBP17.34■□□□□ 0.37
CHMP2A-208ENST00000601220 OR52K1Q8NGK4 314 aa17.34■□□□□ 0.37
CHMP2A-208ENST00000601220 OR2Y1Q8NGV0 311 aa17.34■□□□□ 0.37
CHMP2A-208ENST00000601220 PROKR1Q8TCW9 393 aa17.34■□□□□ 0.37
CHMP2A-208ENST00000601220 SSC4DQ8WTU2 575 aa17.34■□□□□ 0.37
CHMP2A-208ENST00000601220 MRFAP1L1Q96HT8 127 aa17.34■□□□□ 0.37
CHMP2A-208ENST00000601220 SGSM3Q96HU1 749 aa17.34■□□□□ 0.37
CHMP2A-208ENST00000601220 IP6K3Q96PC2 410 aa17.34■□□□□ 0.37
CHMP2A-208ENST00000601220 TEX15Q9BXT5 2789 aa17.34■□□□□ 0.37
CHMP2A-208ENST00000601220 SLAMF7Q9NQ25 335 aa17.34■□□□□ 0.37
CHMP2A-208ENST00000601220 DHCR7Q9UBM7 475 aaKnown RBP17.34■□□□□ 0.37
CHMP2A-208ENST00000601220 SLC2A6Q9UGQ3 507 aa17.34■□□□□ 0.37
CHMP2A-208ENST00000601220 PLAGL1Q9UM63 463 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms