RNA–Protein interactions for RNA: ENST00000597968.1

TRIM28-211, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-211ENST00000597968 ASF1AQ9Y294 204 aa13.17□□□□□ -0.3
TRIM28-211ENST00000597968 MAP4K5Q9Y4K4 846 aa13.17□□□□□ -0.3
TRIM28-211ENST00000597968 A0A0J9YY10 115 aa13.16□□□□□ -0.3
TRIM28-211ENST00000597968 SLC5A10A0PJK1 596 aa13.16□□□□□ -0.3
TRIM28-211ENST00000597968 HEATR9A2RTY3 570 aa13.16□□□□□ -0.3
TRIM28-211ENST00000597968 H3BMH7 237 aa13.16□□□□□ -0.3
TRIM28-211ENST00000597968 IPO13O94829 963 aaKnown RBP13.16□□□□□ -0.3
TRIM28-211ENST00000597968 SUN1O94901 812 aa13.16□□□□□ -0.3
TRIM28-211ENST00000597968 METTL18O95568 372 aa13.16□□□□□ -0.3
TRIM28-211ENST00000597968 ARCN1P48444 511 aaKnown RBP13.16□□□□□ -0.3
TRIM28-211ENST00000597968 LMAN1P49257 510 aa13.16□□□□□ -0.3
TRIM28-211ENST00000597968 SOX8P57073 446 aa13.16□□□□□ -0.3
TRIM28-211ENST00000597968 SPARCL1Q14515 664 aa13.16□□□□□ -0.3
TRIM28-211ENST00000597968 POU6F1Q14863 301 aa13.16□□□□□ -0.3
TRIM28-211ENST00000597968 SLC5A12Q1EHB4 618 aa13.16□□□□□ -0.3
TRIM28-211ENST00000597968 DNAJC21Q5F1R6 531 aaKnown RBP13.16□□□□□ -0.3
TRIM28-211ENST00000597968 FHL5Q5TD97 284 aa13.16□□□□□ -0.3
TRIM28-211ENST00000597968 CPZQ66K79 652 aa13.16□□□□□ -0.3
TRIM28-211ENST00000597968 PIANPQ8IYJ0 282 aa13.16□□□□□ -0.3
TRIM28-211ENST00000597968 PNPLA2Q96AD5 504 aa13.16□□□□□ -0.3
TRIM28-211ENST00000597968 PPM1MQ96MI6 270 aa13.16□□□□□ -0.3
TRIM28-211ENST00000597968 SLC29A3Q9BZD2 475 aa13.16□□□□□ -0.3
TRIM28-211ENST00000597968 GPR83Q9NYM4 423 aa13.16□□□□□ -0.3
TRIM28-211ENST00000597968 ICKQ9UPZ9 632 aa13.16□□□□□ -0.3
TRIM28-211ENST00000597968 MRFAP1Q9Y605 127 aa13.16□□□□□ -0.3
TRIM28-211ENST00000597968 CYSRT1A8MQ03 144 aa13.15□□□□□ -0.3
TRIM28-211ENST00000597968 KLF7O75840 302 aaPredicted RBP13.15□□□□□ -0.3
TRIM28-211ENST00000597968 OR2B3O76000 313 aa13.15□□□□□ -0.3
TRIM28-211ENST00000597968 ALPPP05187 535 aa13.15□□□□□ -0.3
TRIM28-211ENST00000597968 CHRM5P08912 532 aaPredicted RBP13.15□□□□□ -0.3
TRIM28-211ENST00000597968 FOXN2P32314 431 aa13.15□□□□□ -0.3
TRIM28-211ENST00000597968 FDFT1P37268 417 aa13.15□□□□□ -0.3
TRIM28-211ENST00000597968 CDKN1CP49918 316 aaPredicted RBP13.15□□□□□ -0.3
TRIM28-211ENST00000597968 DCDP81605 110 aaKnown RBP13.15□□□□□ -0.3
TRIM28-211ENST00000597968 ACVR1Q04771 509 aa13.15□□□□□ -0.3
TRIM28-211ENST00000597968 AARS2Q5JTZ9 985 aaKnown RBP13.15□□□□□ -0.3
TRIM28-211ENST00000597968 VWA5B1Q5TIE3 1220 aa13.15□□□□□ -0.3
TRIM28-211ENST00000597968 YOD1Q5VVQ6 348 aaPredicted RBP13.15□□□□□ -0.3
TRIM28-211ENST00000597968 JMJD6Q6NYC1 403 aaPredicted RBP13.15□□□□□ -0.3
TRIM28-211ENST00000597968 FBXO38Q6PIJ6 1188 aa13.15□□□□□ -0.3
TRIM28-211ENST00000597968 AFTPHQ6ULP2 937 aa13.15□□□□□ -0.3
TRIM28-211ENST00000597968 IGFL3Q6UXB1 125 aa13.15□□□□□ -0.3
TRIM28-211ENST00000597968 UNC5AQ6ZN44 842 aa13.15□□□□□ -0.3
TRIM28-211ENST00000597968 KIAA1328Q86T90 577 aa13.15□□□□□ -0.3
TRIM28-211ENST00000597968 RNF10Q8N5U6 811 aaKnown RBP13.15□□□□□ -0.3
TRIM28-211ENST00000597968 ZBTB2Q8N680 514 aa13.15□□□□□ -0.3
TRIM28-211ENST00000597968 CLEC1AQ8NC01 280 aa13.15□□□□□ -0.3
TRIM28-211ENST00000597968 PHC3Q8NDX5 983 aa13.15□□□□□ -0.3
TRIM28-211ENST00000597968 FDCSPQ8NFU4 85 aa13.15□□□□□ -0.3
TRIM28-211ENST00000597968 ASZ1Q8WWH4 475 aa13.15□□□□□ -0.3
TRIM28-211ENST00000597968 ELMO1Q92556 727 aa13.15□□□□□ -0.3
TRIM28-211ENST00000597968 DLG3Q92796 817 aa13.15□□□□□ -0.3
TRIM28-211ENST00000597968 RNF31Q96EP0 1072 aa13.15□□□□□ -0.3
TRIM28-211ENST00000597968 HES6Q96HZ4 224 aa13.15□□□□□ -0.3
TRIM28-211ENST00000597968 OR2A14Q96R47 310 aa13.15□□□□□ -0.3
TRIM28-211ENST00000597968 HGH1Q9BTY7 390 aa13.15□□□□□ -0.3
TRIM28-211ENST00000597968 LRRC4CQ9HCJ2 640 aa13.15□□□□□ -0.3
TRIM28-211ENST00000597968 SLAMF7Q9NQ25 335 aa13.15□□□□□ -0.3
TRIM28-211ENST00000597968 GPN3Q9UHW5 284 aaPredicted RBP13.15□□□□□ -0.3
TRIM28-211ENST00000597968 AP3B1O00203 1094 aa13.14□□□□□ -0.31
TRIM28-211ENST00000597968 PEX12O00623 359 aa13.14□□□□□ -0.31
TRIM28-211ENST00000597968 ZSCAN9O15535 394 aaPredicted RBP13.14□□□□□ -0.31
TRIM28-211ENST00000597968 ONECUT2O95948 504 aa13.14□□□□□ -0.31
TRIM28-211ENST00000597968 PIM1P11309 404 aaPredicted RBP13.14□□□□□ -0.31
TRIM28-211ENST00000597968 UGT2B7P16662 529 aa13.14□□□□□ -0.31
TRIM28-211ENST00000597968 TPH1P17752 444 aa13.14□□□□□ -0.31
TRIM28-211ENST00000597968 ADRA1DP25100 572 aa13.14□□□□□ -0.31
TRIM28-211ENST00000597968 GABRA4P48169 554 aa13.14□□□□□ -0.31
TRIM28-211ENST00000597968 RAB28P51157 221 aa13.14□□□□□ -0.31
TRIM28-211ENST00000597968 ARSFP54793 590 aa13.14□□□□□ -0.31
TRIM28-211ENST00000597968 PRKG2Q13237 762 aa13.14□□□□□ -0.31
TRIM28-211ENST00000597968 SYTL3Q4VX76 610 aa13.14□□□□□ -0.31
TRIM28-211ENST00000597968 PRAMEF17Q5VTA0 474 aa13.14□□□□□ -0.31
TRIM28-211ENST00000597968 LCN10Q6JVE6 187 aa13.14□□□□□ -0.31
TRIM28-211ENST00000597968 SLC22A15Q8IZD6 547 aa13.14□□□□□ -0.31
TRIM28-211ENST00000597968 DNAAF3Q8N9W5 541 aa13.14□□□□□ -0.31
TRIM28-211ENST00000597968 OR5AR1Q8NGP9 310 aa13.14□□□□□ -0.31
TRIM28-211ENST00000597968 OR2Y1Q8NGV0 311 aa13.14□□□□□ -0.31
TRIM28-211ENST00000597968 NAT14Q8WUY8 206 aa13.14□□□□□ -0.31
TRIM28-211ENST00000597968 TM9SF4Q92544 642 aa13.14□□□□□ -0.31
TRIM28-211ENST00000597968 PTERQ96BW5 349 aa13.14□□□□□ -0.31
TRIM28-211ENST00000597968 GBP5Q96PP8 586 aa13.14□□□□□ -0.31
TRIM28-211ENST00000597968 BAG1Q99933 345 aaPredicted RBP13.14□□□□□ -0.31
TRIM28-211ENST00000597968 TMEM121Q9BTD3 319 aa13.14□□□□□ -0.31
TRIM28-211ENST00000597968 CARD6Q9BX69 1037 aa13.14□□□□□ -0.31
TRIM28-211ENST00000597968 RAB11FIP5Q9BXF6 653 aa13.14□□□□□ -0.31
TRIM28-211ENST00000597968 TXLNGQ9NUQ3 528 aa13.14□□□□□ -0.31
TRIM28-211ENST00000597968 INTS7Q9NVH2 962 aaKnown RBP13.14□□□□□ -0.31
TRIM28-211ENST00000597968 NDOR1Q9UHB4 597 aa13.14□□□□□ -0.31
TRIM28-211ENST00000597968 PLCL2Q9UPR0 1127 aa13.14□□□□□ -0.31
TRIM28-211ENST00000597968 LRRK2Q5S007 2527 aa13.14□□□□□ -0.31
TRIM28-211ENST00000597968 CCDC78A2IDD5 438 aa13.13□□□□□ -0.31
TRIM28-211ENST00000597968 BHMG1C9JSJ3 638 aaPredicted RBP13.13□□□□□ -0.31
TRIM28-211ENST00000597968 CCL22O00626 93 aa13.13□□□□□ -0.31
TRIM28-211ENST00000597968 KPNA5O15131 536 aa13.13□□□□□ -0.31
TRIM28-211ENST00000597968 DDX3YO15523 660 aaKnown RBP13.13□□□□□ -0.31
TRIM28-211ENST00000597968 DDAH2O95865 285 aa13.13□□□□□ -0.31
TRIM28-211ENST00000597968 S1PR4O95977 384 aa13.13□□□□□ -0.31
TRIM28-211ENST00000597968 ALBP02768 609 aa13.13□□□□□ -0.31
TRIM28-211ENST00000597968 FOLR3P41439 243 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms