RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 UNC5CO95185 931 aa13.27□□□□□ -0.29
SHKBP1-208ENST00000595726 IPO7O95373 1038 aaKnown RBP13.27□□□□□ -0.29
SHKBP1-208ENST00000595726 HBQ1P09105 142 aa13.27□□□□□ -0.29
SHKBP1-208ENST00000595726 MSL3P1P0C860 447 aa13.27□□□□□ -0.29
SHKBP1-208ENST00000595726 ZFXP17010 805 aaPredicted RBP13.27□□□□□ -0.29
SHKBP1-208ENST00000595726 CDKN2BP42772 138 aa13.27□□□□□ -0.29
SHKBP1-208ENST00000595726 MARCKSL1P49006 195 aa13.27□□□□□ -0.29
SHKBP1-208ENST00000595726 DYNLT1P63172 113 aa13.27□□□□□ -0.29
SHKBP1-208ENST00000595726 IFI35P80217 286 aaPredicted RBP13.27□□□□□ -0.29
SHKBP1-208ENST00000595726 DCDP81605 110 aaKnown RBP13.27□□□□□ -0.29
SHKBP1-208ENST00000595726 ADORA2A-AS1P86434 159 aa13.27□□□□□ -0.29
SHKBP1-208ENST00000595726 PRKAA1Q13131 559 aa13.27□□□□□ -0.29
SHKBP1-208ENST00000595726 DEFB110Q30KQ9 67 aa13.27□□□□□ -0.29
SHKBP1-208ENST00000595726 FCRL6Q6DN72 434 aa13.27□□□□□ -0.29
SHKBP1-208ENST00000595726 MRPL14Q6P1L8 145 aaKnown RBP13.27□□□□□ -0.29
SHKBP1-208ENST00000595726 DAAM2Q86T65 1068 aa13.27□□□□□ -0.29
SHKBP1-208ENST00000595726 CEP97Q8IW35 865 aa13.27□□□□□ -0.29
SHKBP1-208ENST00000595726 ACRBPQ8NEB7 543 aa13.27□□□□□ -0.29
SHKBP1-208ENST00000595726 NR4A3Q92570 626 aa13.27□□□□□ -0.29
SHKBP1-208ENST00000595726 TRIB3Q96RU7 358 aa13.27□□□□□ -0.29
SHKBP1-208ENST00000595726 BAG1Q99933 345 aaPredicted RBP13.27□□□□□ -0.29
SHKBP1-208ENST00000595726 EPS8L2Q9H6S3 715 aa13.27□□□□□ -0.29
SHKBP1-208ENST00000595726 MAGEE1Q9HCI5 957 aa13.27□□□□□ -0.29
SHKBP1-208ENST00000595726 RAD18Q9NS91 495 aa13.27□□□□□ -0.29
SHKBP1-208ENST00000595726 SEMA3GQ9NS98 782 aa13.27□□□□□ -0.29
SHKBP1-208ENST00000595726 HAUS2Q9NVX0 235 aa13.27□□□□□ -0.29
SHKBP1-208ENST00000595726 SPO11Q9Y5K1 396 aa13.27□□□□□ -0.29
SHKBP1-208ENST00000595726 BTNL10A8MVZ5 291 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 H3BMH7 237 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 PPP1R12AO14974 1030 aaPredicted RBP13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 OR2B3O76000 313 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 POLBP06746 335 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 MST1P26927 711 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 CA7P43166 264 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 KRT33BQ14525 404 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 GSE1Q14687 1217 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 PDK1Q15118 436 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 PCSK7Q16549 785 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 NKAIN1Q4KMZ8 207 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 FNBP1LQ5T0N5 605 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 RPUSD3Q6P087 351 aaKnown RBP13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 XKRXQ6PP77 449 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 RPTNQ6XPR3 784 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 DET1Q7L5Y6 550 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 KATNAL2Q8IYT4 538 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 GPR135Q8IZ08 494 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 LILRA3Q8N6C8 439 aaPredicted RBP13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 CNTD1Q8N815 330 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 COG1Q8WTW3 980 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 ZFPM2Q8WW38 1151 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 KRT35Q92764 455 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 AGAP3Q96P47 875 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 C17orf62Q9BQA9 187 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 MESP1Q9BRJ9 268 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 LACRTQ9GZZ8 138 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 SRMSQ9H3Y6 488 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 SLC22A11Q9NSA0 550 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 PLA2G3Q9NZ20 509 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 IMPACTQ9P2X3 320 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 DUSP10Q9Y6W6 482 aa13.26□□□□□ -0.29
SHKBP1-208ENST00000595726 hCG_1818297A0A087WSY0 165 aa13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 BTN3A1O00481 513 aa13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 SOCS6O14544 535 aa13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 PJA2O43164 708 aa13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 MT-CYBP00156 380 aaPredicted RBP13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 CD99P14209 185 aa13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 CD1EP15812 388 aa13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 PECAM1P16284 738 aaPredicted RBP13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 ART1P52961 327 aa13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 AP1B1Q10567 949 aa13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 TFDP3Q5H9I0 405 aa13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 IRAK1BP1Q5VVH5 260 aa13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 KAZNQ674X7 775 aa13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 RHBDD2Q6NTF9 364 aa13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 KIRREL2Q6UWL6 708 aa13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 ISLR2Q6UXK2 745 aa13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 SHISA6Q6ZSJ9 500 aa13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 TRIM73Q86UV7 250 aa13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 ZNF655Q8N720 491 aaPredicted RBP13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 SPC24Q8NBT2 197 aa13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 BRSK1Q8TDC3 778 aa13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 LCN9Q8WX39 176 aa13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 MTFMTQ96DP5 389 aaKnown RBP13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 C14orf79Q96F83 325 aa13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 RBM41Q96IZ5 413 aaKnown RBP13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 THOC3Q96J01 351 aaKnown RBP13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 RMDN2Q96LZ7 410 aa13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 TRIM56Q9BRZ2 755 aaKnown RBP13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 TMUB1Q9BVT8 246 aa13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 CEP41Q9BYV8 373 aa13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 PITPNM3Q9BZ71 974 aa13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 LHPPQ9H008 270 aa13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 MCCC2Q9HCC0 563 aa13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 IL26Q9NPH9 171 aa13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 SAE1Q9UBE0 346 aaPredicted RBP13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 CDC23Q9UJX2 597 aa13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 HS3ST3B1Q9Y662 390 aa13.25□□□□□ -0.29
SHKBP1-208ENST00000595726 MAP3K7O43318 606 aa13.24□□□□□ -0.29
SHKBP1-208ENST00000595726 CST8O60676 142 aa13.24□□□□□ -0.29
SHKBP1-208ENST00000595726 ZRANB2O95218 330 aaKnown RBP eCLIP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms