RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 NELFEP18615 380 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 PRKD1Q15139 912 aaPredicted RBP13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 BCL2L14Q9BZR8 327 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 CD320Q9NPF0 282 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 PDE10AQ9Y233 779 aa13.09□□□□□ -0.31
SMARCA4-216ENST00000591545 SOCS7O14512 581 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 SCAMP1O15126 338 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 TIMP1P01033 207 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 AGXTP21549 392 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 SRSF11Q05519 484 aaKnown RBP13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 LARS2Q15031 903 aaKnown RBP13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 ARMCX6Q7L4S7 300 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 TMEM110Q86TL2 294 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 P2RY13Q9BPV8 354 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 OSBPL7Q9BZF2 842 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 SMOC2Q9H3U7 446 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 GIN1Q9NXP7 522 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 PPEF2O14830 753 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 SLC7A4O43246 635 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 LAMTOR5O43504 91 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 ZBTB11O95625 1053 aaPredicted RBP13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 MT-CYBP00156 380 aaPredicted RBP13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 GOT2P00505 430 aaKnown RBP13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 RHOP08100 348 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 BMPR1AP36894 532 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 ARHGDIBP52566 201 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 ZNF132P52740 706 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 IL23RQ5VWK5 629 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 SYPL2Q5VXT5 272 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 RTL4Q6ZR62 310 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 PEX5LQ8IYB4 626 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 TMCO6Q96DC7 493 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 KAT8Q9H7Z6 458 aaKnown RBP13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 IL1RAPQ9NPH3 570 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 SIRPGQ9P1W8 387 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 OR1F1O43749 312 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 MATN4O95460 622 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 IDH3AP50213 366 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 DPYSL2Q16555 572 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 LY6G5CQ5SRR4 150 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 ZNF730Q6ZMV8 503 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 RNF19BQ6ZMZ0 732 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 SNX20Q7Z614 316 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 FAM46DQ8NEK8 389 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 SLC38A4Q969I6 547 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 YTHDF1Q9BYJ9 559 aaKnown RBP13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 TMEM27Q9HBJ8 222 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 TRPV5Q9NQA5 729 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 COPS7AQ9UBW8 275 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 B4DGG1 531 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 MCIDASD6RGH6 385 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 IL18Q14116 193 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 SNAPC1Q16533 368 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 VPS26BQ4G0F5 336 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 DCST1Q5T197 706 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 SLC30A8Q8IWU4 369 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 GATA5Q9BWX5 397 aaPredicted RBP13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 KCNN2Q9H2S1 579 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 TRNAU1APQ9NX07 287 aaKnown RBP13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 IGSF9Q9P2J2 1179 aa13.08□□□□□ -0.32
SMARCA4-216ENST00000591545 C9IYK1 514 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 FAM155BO75949 473 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 C9P02748 559 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 ALDH4A1P30038 563 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 TM4SF4P48230 202 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 KCNQ1P51787 676 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 SLC18A1P54219 525 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 SIM2Q14190 667 aaPredicted RBP13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 DPY19L1Q2PZI1 675 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 IPCEF1Q8WWN9 437 aaPredicted RBP13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 ZNF516Q92618 1163 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 DIRAS2Q96HU8 199 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 IPPKQ9H8X2 491 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 AGPSO00116 658 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 MAGEB3O15480 346 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 AIREO43918 545 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 ADH1BP00325 375 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 ACP5P13686 325 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 GKN2Q86XP6 184 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 SAMD14Q8IZD0 417 aaPredicted RBP13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 PACRGLQ8N7B6 248 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 GRPEL2Q8TAA5 225 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 ZSCAN5AQ9BUG6 496 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 SPATA6Q9NWH7 488 aaPredicted RBP13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 U3KQV3 271 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 FFAR2O15552 330 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 PSIP1O75475 530 aaKnown RBP13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 MYBPC3Q14896 1274 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 OLFML2AQ68BL7 652 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 Q6ZVU0 165 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 FAM129CQ86XR2 697 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 SHISA4Q96DD7 197 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 DPYSL5Q9BPU6 564 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 KXD1Q9BQD3 176 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 SP140LQ9H930 580 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 GRHL1Q9NZI5 618 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 A0A0X1KG70 313 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 TCRBV7S2A1N4TA0A589 114 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms