RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 PDIA2Q13087 525 aaKnown RBP12.23□□□□□ -0.45
SMARCE1-218ENST00000582955 TGIF1Q15583 401 aa12.23□□□□□ -0.45
SMARCE1-218ENST00000582955 TTC23LQ6PF05 361 aa12.23□□□□□ -0.45
SMARCE1-218ENST00000582955 FBXO38Q6PIJ6 1188 aa12.23□□□□□ -0.45
SMARCE1-218ENST00000582955 UNC5DQ6UXZ4 953 aa12.23□□□□□ -0.45
SMARCE1-218ENST00000582955 UNC5AQ6ZN44 842 aa12.23□□□□□ -0.45
SMARCE1-218ENST00000582955 ZBTB2Q8N680 514 aa12.23□□□□□ -0.45
SMARCE1-218ENST00000582955 SIDT2Q8NBJ9 832 aaKnown RBP12.23□□□□□ -0.45
SMARCE1-218ENST00000582955 LRRC39Q96DD0 335 aa12.23□□□□□ -0.45
SMARCE1-218ENST00000582955 CERS2Q96G23 380 aa12.23□□□□□ -0.45
SMARCE1-218ENST00000582955 CRELD1Q96HD1 420 aa12.23□□□□□ -0.45
SMARCE1-218ENST00000582955 ELMO2Q96JJ3 720 aa12.23□□□□□ -0.45
SMARCE1-218ENST00000582955 TEFMQ96QE5 360 aaKnown RBP12.23□□□□□ -0.45
SMARCE1-218ENST00000582955 SOHLH2Q9NX45 425 aa12.23□□□□□ -0.45
SMARCE1-218ENST00000582955 CIDEBQ9UHD4 219 aa12.23□□□□□ -0.45
SMARCE1-218ENST00000582955 POMT2Q9UKY4 750 aa12.23□□□□□ -0.45
SMARCE1-218ENST00000582955 LHX6Q9UPM6 363 aa12.23□□□□□ -0.45
SMARCE1-218ENST00000582955 UTP11Q9Y3A2 253 aaKnown RBP12.23□□□□□ -0.45
SMARCE1-218ENST00000582955 TEX264Q9Y6I9 313 aa12.23□□□□□ -0.45
SMARCE1-218ENST00000582955 PIPSLA2A3N6 862 aa12.22□□□□□ -0.45
SMARCE1-218ENST00000582955 C2orf74A8MZ97 194 aa12.22□□□□□ -0.45
SMARCE1-218ENST00000582955 HAUS5O94927 633 aa12.22□□□□□ -0.45
SMARCE1-218ENST00000582955 PRDX3P30048 256 aaKnown RBP12.22□□□□□ -0.45
SMARCE1-218ENST00000582955 CARSP49589 748 aaKnown RBP12.22□□□□□ -0.45
SMARCE1-218ENST00000582955 TMPRSS3P57727 454 aa12.22□□□□□ -0.45
SMARCE1-218ENST00000582955 KCNAB1Q14722 419 aa12.22□□□□□ -0.45
SMARCE1-218ENST00000582955 CYB5D1Q6P9G0 228 aa12.22□□□□□ -0.45
SMARCE1-218ENST00000582955 CNSTQ6PJW8 725 aa12.22□□□□□ -0.45
SMARCE1-218ENST00000582955 ZNF572Q7Z3I7 529 aaPredicted RBP12.22□□□□□ -0.45
SMARCE1-218ENST00000582955 KMT5CQ86Y97 462 aa12.22□□□□□ -0.45
SMARCE1-218ENST00000582955 RASGRP3Q8IV61 690 aa12.22□□□□□ -0.45
SMARCE1-218ENST00000582955 DCUN1D3Q8IWE4 304 aa12.22□□□□□ -0.45
SMARCE1-218ENST00000582955 ADGRF3Q8IZF5 1079 aa12.22□□□□□ -0.45
SMARCE1-218ENST00000582955 RNF31Q96EP0 1072 aa12.22□□□□□ -0.45
SMARCE1-218ENST00000582955 SLC41A2Q96JW4 573 aa12.22□□□□□ -0.45
SMARCE1-218ENST00000582955 PPM1MQ96MI6 270 aa12.22□□□□□ -0.45
SMARCE1-218ENST00000582955 FOPNLQ96NB1 174 aa12.22□□□□□ -0.45
SMARCE1-218ENST00000582955 WDR83Q9BRX9 315 aaKnown RBP12.22□□□□□ -0.45
SMARCE1-218ENST00000582955 ZPBPQ9BS86 351 aa12.22□□□□□ -0.45
SMARCE1-218ENST00000582955 RAB17Q9H0T7 212 aa12.22□□□□□ -0.45
SMARCE1-218ENST00000582955 ACTR10Q9NZ32 417 aa12.22□□□□□ -0.45
SMARCE1-218ENST00000582955 WHRNQ9P202 907 aa12.22□□□□□ -0.45
SMARCE1-218ENST00000582955 SEMA5BQ9P283 1151 aa12.22□□□□□ -0.45
SMARCE1-218ENST00000582955 GALPQ9UBC7 116 aa12.22□□□□□ -0.45
SMARCE1-218ENST00000582955 RUVBL2Q9Y230 463 aaKnown RBP12.22□□□□□ -0.45
SMARCE1-218ENST00000582955 NFS1Q9Y697 457 aa12.22□□□□□ -0.45
SMARCE1-218ENST00000582955 ADAMTS20P59510 1910 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 SLC9B1P1A6NJY1 282 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 TP73O15350 636 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 ZBTB11O95625 1053 aaPredicted RBP12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 CHRM5P08912 532 aaPredicted RBP12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 EBLN1P0CF75 366 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 TPBGLP0DKB5 382 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 FOLR1P15328 257 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 BDKRB1P46663 353 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 ATP1A2P50993 1020 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 UCNP55089 124 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 CXADRP78310 365 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 HSD11B2P80365 405 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 ACY1Q03154 408 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 TUBB3Q13509 450 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 IL11RAQ14626 422 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 FASTKD3Q14CZ7 662 aaKnown RBP12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 WHAMMP3Q1A5X7 153 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 TTLL9Q3SXZ7 439 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 ACSBG2Q5FVE4 666 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 MANEAQ5SRI9 462 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 TMTC4Q5T4D3 741 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 DUPD1Q68J44 220 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 ZNF549Q6P9A3 640 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 CARFQ8N187 725 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 C2CD4AQ8NCU7 369 aaPredicted RBP12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 FBXO36Q8NEA4 188 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 KCNJ9Q92806 393 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 CCNL2Q96S94 520 aaPredicted RBP12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 AARSD1Q9BTE6 412 aaKnown RBP12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 KLHL25Q9H0H3 589 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 PLAC1Q9HBJ0 212 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 CPNE5Q9HCH3 593 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 PDE7BQ9NP56 450 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 C1GALT1Q9NS00 363 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 OR6C2Q9NZP2 312 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 SLC17A6Q9P2U8 582 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 SLC39A10Q9ULF5 831 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 MRFAP1Q9Y605 127 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 COMMD10Q9Y6G5 202 aa12.21□□□□□ -0.45
SMARCE1-218ENST00000582955 ZFHX4Q86UP3 3567 aa12.21□□□□□ -0.46
SMARCE1-218ENST00000582955 AHCTF1Q8WYP5 2266 aa12.2□□□□□ -0.46
SMARCE1-218ENST00000582955 DSPP15924 2871 aaKnown RBP12.2□□□□□ -0.46
SMARCE1-218ENST00000582955 ISM1B1AKI9 464 aa12.2□□□□□ -0.46
SMARCE1-218ENST00000582955 E7ESA3 106 aa12.2□□□□□ -0.46
SMARCE1-218ENST00000582955 KIF2AO00139 706 aaPredicted RBP12.2□□□□□ -0.46
SMARCE1-218ENST00000582955 MAP3K7O43318 606 aa12.2□□□□□ -0.46
SMARCE1-218ENST00000582955 RAD1O60671 282 aa12.2□□□□□ -0.46
SMARCE1-218ENST00000582955 VPS26AO75436 327 aa12.2□□□□□ -0.46
SMARCE1-218ENST00000582955 STK17BO94768 372 aa12.2□□□□□ -0.46
SMARCE1-218ENST00000582955 C1orf105O95561 183 aa12.2□□□□□ -0.46
SMARCE1-218ENST00000582955 PVRP15151 417 aa12.2□□□□□ -0.46
SMARCE1-218ENST00000582955 UGT2B7P16662 529 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms