RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 FAR2Q96K12 515 aa4.81□□□□□ -1.64
IFT20-205ENST00000578009 UBXN10Q96LJ8 280 aa4.81□□□□□ -1.64
IFT20-205ENST00000578009 SORT1Q99523 831 aa4.81□□□□□ -1.64
IFT20-205ENST00000578009 RAD9AQ99638 391 aa4.81□□□□□ -1.64
IFT20-205ENST00000578009 OMDQ99983 421 aa4.81□□□□□ -1.64
IFT20-205ENST00000578009 TRMOQ9BU70 441 aa4.81□□□□□ -1.64
IFT20-205ENST00000578009 MECRQ9BV79 373 aa4.81□□□□□ -1.64
IFT20-205ENST00000578009 GATA5Q9BWX5 397 aaPredicted RBP4.81□□□□□ -1.64
IFT20-205ENST00000578009 C1orf21Q9H246 121 aa4.81□□□□□ -1.64
IFT20-205ENST00000578009 MMADHCQ9H3L0 296 aaPredicted RBP4.81□□□□□ -1.64
IFT20-205ENST00000578009 TASP1Q9H6P5 420 aa4.81□□□□□ -1.64
IFT20-205ENST00000578009 MAGEE1Q9HCI5 957 aa4.81□□□□□ -1.64
IFT20-205ENST00000578009 ZNF334Q9HCZ1 680 aaPredicted RBP4.81□□□□□ -1.64
IFT20-205ENST00000578009 POLR3BQ9NW08 1133 aaPredicted RBP4.81□□□□□ -1.64
IFT20-205ENST00000578009 DNAJC28Q9NX36 388 aa4.81□□□□□ -1.64
IFT20-205ENST00000578009 IL1RAPL1Q9NZN1 696 aa4.81□□□□□ -1.64
IFT20-205ENST00000578009 ARHGAP26Q9UNA1 814 aa4.81□□□□□ -1.64
IFT20-205ENST00000578009 DNAJC16Q9Y2G8 782 aa4.81□□□□□ -1.64
IFT20-205ENST00000578009 RAP2CQ9Y3L5 183 aa4.81□□□□□ -1.64
IFT20-205ENST00000578009 COMMD10Q9Y6G5 202 aa4.81□□□□□ -1.64
IFT20-205ENST00000578009 ZNF638Q14966 1978 aaKnown RBP4.81□□□□□ -1.64
IFT20-205ENST00000578009 LTBP2Q14767 1821 aa4.81□□□□□ -1.64
IFT20-205ENST00000578009 HTTP42858 3142 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 CENPVL1A0A0U1RR11 272 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 A0A1W2PQ67 120 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 CCDC162PA2VCL2 907 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 CCDC85CA6NKD9 419 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 KRTAP29-1A8MX34 341 aaPredicted RBP4.8□□□□□ -1.64
IFT20-205ENST00000578009 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.8□□□□□ -1.64
IFT20-205ENST00000578009 ANKRD66B4E2M5 251 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 F8W8V4 182 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 H0Y626 953 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 CBX4O00257 560 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 ZNF195O14628 629 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 CHUKO15111 745 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 HDAC3O15379 428 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 PDPK1O15530 556 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 HTRA2O43464 458 aaPredicted RBP4.8□□□□□ -1.64
IFT20-205ENST00000578009 ITM2AO43736 263 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 TSPAN3O60637 253 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 TBL1XO60907 577 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 SOCS5O75159 536 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 TMCC1O94876 653 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 HSPA4LO95757 839 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 TOP3BO95985 862 aaKnown RBP4.8□□□□□ -1.64
IFT20-205ENST00000578009 RB1P06400 928 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 SBK3P0C264 359 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 HNRNPLP14866 589 aaKnown RBP eCLIP4.8□□□□□ -1.64
IFT20-205ENST00000578009 LPOP22079 712 aaPredicted RBP4.8□□□□□ -1.64
IFT20-205ENST00000578009 ITGB8P26012 769 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 GABRR2P28476 465 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 SERPINB3P29508 390 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 PRDX6P30041 224 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 HNRNPH1P31943 449 aaKnown RBP4.8□□□□□ -1.64
IFT20-205ENST00000578009 SLC8A1P32418 973 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 PPARGP37231 505 aaPredicted RBP4.8□□□□□ -1.64
IFT20-205ENST00000578009 TTPAP49638 278 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 RPL14P50914 215 aaKnown RBP4.8□□□□□ -1.64
IFT20-205ENST00000578009 SCNN1BP51168 640 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 STC1P52823 247 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 IRX1P78414 480 aaPredicted RBP4.8□□□□□ -1.64
IFT20-205ENST00000578009 ARF5P84085 180 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 MPP1Q00013 466 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 FPGSQ05932 587 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 PRKAA1Q13131 559 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 TUBB3Q13509 450 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 ITGA9Q13797 1035 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 RCN2Q14257 317 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 DMC1Q14565 340 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 FAM214AQ32MH5 1076 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 FSCBQ5H9T9 825 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 TECRLQ5HYJ1 363 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 AARS2Q5JTZ9 985 aaKnown RBP4.8□□□□□ -1.64
IFT20-205ENST00000578009 SH2D4BQ5SQS7 431 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 WASHC2DQ5SRD0 308 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 LRRC8EQ6NSJ5 796 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 PSRC1Q6PGN9 363 aaPredicted RBP4.8□□□□□ -1.64
IFT20-205ENST00000578009 CNSTQ6PJW8 725 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 AFTPHQ6ULP2 937 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 EPGNQ6UW88 154 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 CERS6Q6ZMG9 384 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 KDELC2Q7Z4H8 507 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 SLC41A1Q8IVJ1 513 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 CEP97Q8IW35 865 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 MFSD6LQ8IWD5 586 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 SUGP1Q8IWZ8 645 aaKnown RBP4.8□□□□□ -1.64
IFT20-205ENST00000578009 ARHGAP24Q8N264 748 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 FSTL5Q8N475 847 aaPredicted RBP4.8□□□□□ -1.64
IFT20-205ENST00000578009 TTC30BQ8N4P2 665 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 ARL14EPQ8N8R7 260 aaPredicted RBP4.8□□□□□ -1.64
IFT20-205ENST00000578009 TDRD5Q8NAT2 981 aaKnown RBP4.8□□□□□ -1.64
IFT20-205ENST00000578009 RHEBL1Q8TAI7 183 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 HEXDCQ8WVB3 486 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 KCTD4Q8WVF5 259 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 HERVK_113Q902F9 699 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 WBP2Q969T9 261 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 NXNL1Q96CM4 212 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 OTUB2Q96DC9 234 aa4.8□□□□□ -1.64
IFT20-205ENST00000578009 PDLIM5Q96HC4 596 aaKnown RBP4.8□□□□□ -1.64
IFT20-205ENST00000578009 ELMO2Q96JJ3 720 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms