RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 RMDN2Q96LZ7 410 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 MRPL57Q9BQC6 102 aaKnown RBP6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 HGH1Q9BTY7 390 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 RAB11FIP5Q9BXF6 653 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 WWP1Q9H0M0 922 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 KCNH6Q9H252 994 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 OR52A5Q9H2C5 316 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 ARRDC1-AS1Q9H2J1 176 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 TCEAL2Q9H3H9 227 aaPredicted RBP6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 TFB2MQ9H5Q4 396 aaKnown RBP6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 GAREM1Q9H706 876 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 IGSF5Q9NSI5 407 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 TMEM74BQ9NUR3 256 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 ARL15Q9NXU5 204 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 UTP6Q9NYH9 597 aaKnown RBP6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 WWOXQ9NZC7 414 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 NUDT4Q9NZJ9 180 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 TAAR2Q9P1P5 351 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 CPSF2Q9P2I0 782 aaKnown RBP6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 GALPQ9UBC7 116 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 SLC23A2Q9UGH3 650 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 TMCO1Q9UM00 188 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 SNX11Q9Y5W9 270 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 COLEC10Q9Y6Z7 277 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 MYO18AQ92614 2054 aaKnown RBP6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 KMT2EQ8IZD2 1858 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 MYO10Q9HD67 2058 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 KIR2DS5A0A0G2JLQ3 304 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 A0A0G2JNG1 304 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 OR52A4PA6NMU1 304 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 TTLL8A6PVC2 850 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 PATE3B3GLJ2 98 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 LMO7DNF2Z398 122 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 KIR2DS3K7RE56 304 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 CDC7O00311 574 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 FFAR2O15552 330 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 TYROBPO43914 113 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 PLIN3O60664 434 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 PIAS2O75928 621 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 GUCA1CO95843 209 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 TSPAN12O95859 305 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 VIPP01282 170 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 ANXA5P08758 320 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 TPBGLP0DKB5 382 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 MTHFD1P11586 935 aaKnown RBP6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 PDHA2P29803 388 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 RPA3P35244 121 aaPredicted RBP6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 ARL1P40616 181 aaPredicted RBP6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 AP1S2P56377 157 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 TIAL1Q01085 375 aaKnown RBP eCLIP6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 IL9RQ01113 521 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 GBX1Q14549 363 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 KIR2DS5Q14953 304 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 CCDC6Q16204 474 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 DEFB133Q30KQ1 61 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 HLA-BQ31612 363 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 TNFAIP8L3Q5GJ75 292 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 METRNLQ641Q3 311 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 DUS1LQ6P1R4 473 aaKnown RBP6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 SLC23A3Q6PIS1 610 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 TMEM207Q6UWW9 146 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 SLC9B2Q86UD5 537 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 VRK3Q8IV63 474 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 SLC22A9Q8IVM8 553 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 TBC1D21Q8IYX1 336 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 TCAIMQ8N3R3 496 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 SDR16C5Q8N3Y7 309 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 FBXO39Q8N4B4 442 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 PHC3Q8NDX5 983 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 OR5K2Q8NHB8 316 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 RHEBL1Q8TAI7 183 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 MAPK15Q8TD08 544 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 GPBAR1Q8TDU6 330 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 ZDHHC1Q8WTX9 485 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 ATL1Q8WXF7 558 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 TFGQ92734 400 aaPredicted RBP6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 KIAA1191Q96A73 305 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 RAD51AP1Q96B01 352 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 CCDC126Q96EE4 140 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 PDLIM5Q96HC4 596 aaKnown RBP6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 UBXN10Q96LJ8 280 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 FERD3LQ96RJ6 166 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 DUSP23Q9BVJ7 150 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 MVB12BQ9H7P6 319 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 PARVBQ9HBI1 364 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 CAPN10Q9HC96 672 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 FSCN3Q9NQT6 498 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 PRDM8Q9NQV8 689 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 POT1Q9NUX5 634 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 INTS9Q9NV88 658 aaKnown RBP6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 SIRPGQ9P1W8 387 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 TBC1D29Q9UFV1 150 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 POLG2Q9UHN1 485 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 CDYLQ9Y232 598 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 TDRKHQ9Y2W6 561 aaKnown RBP6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 PLLPQ9Y342 182 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 PLEKHM1Q9Y4G2 1056 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 OARD1Q9Y530 152 aa6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 PCYT1BQ9Y5K3 369 aaPredicted RBP6.42□□□□□ -1.38
CTDNEP1-204ENST00000570484 CFAP20Q9Y6A4 193 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms