RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	BNIPL	Q7Z465	357 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	TRIM74	Q86UV6	250 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	TRIM73	Q86UV7	250 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	METTL23	Q86XA0	190 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	SRRM1	Q8IYB3	904 aa	Known RBP	4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	ZDHHC23	Q8IYP9	409 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	ZNF444	Q8N0Y2	327 aa	Predicted RBP	4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	TAGAP	Q8N103	731 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	ADSSL1	Q8N142	457 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	KRT222	Q8N1A0	295 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	ZCCHC9	Q8N567	271 aa	Known RBP	4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	AADAT	Q8N5Z0	425 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	CADM4	Q8NFZ8	388 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	C16orf52	Q8NHV5	167 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	U2AF1L4	Q8WU68	220 aa	Known RBP	4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	CASP10	Q92851	521 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	RPL36AL	Q969Q0	106 aa	Known RBP	4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	FAM162A	Q96A26	154 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	PDLIM5	Q96HC4	596 aa	Known RBP	4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	CNOT6L	Q96LI5	555 aa	Known RBP	4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	NACA2	Q9H009	215 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	WNT5B	Q9H1J7	359 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	HSD3B7	Q9H2F3	369 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	FOXP1	Q9H334	677 aa	Predicted RBP	4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	MMADHC	Q9H3L0	296 aa	Predicted RBP	4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	GLRX2	Q9NS18	164 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	SPATS2L	Q9NUQ6	558 aa	Known RBP	4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	POT1	Q9NUX5	634 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	NMRK1	Q9NWW6	199 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	C5AR2	Q9P296	337 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	HEY2	Q9UBP5	337 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	LIMA1	Q9UHB6	759 aa	Known RBP	4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	ZNF215	Q9UL58	517 aa	Predicted RBP	4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	PIN4	Q9Y237	131 aa	Known RBP	4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	CARD8	Q9Y2G2	431 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	DDX49	Q9Y6V7	483 aa	Known RBP	4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	MKI67	P46013	3256 aa	Known RBP	4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	RAD50	Q92878	1312 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	LCT	P09848	1927 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	ALPK3	Q96L96	1907 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	RNF103-CHMP3	A0A140T963	221 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	LRRIQ4	A6NIV6	560 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	GPR89A	B7ZAQ6	455 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	PROB1	E7EW31	1015 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	RNF103	O00237	685 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	CETN3	O15182	167 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	VILL	O15195	856 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	MAGEB3	O15480	346 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	TLX3	O43711	291 aa	Predicted RBP	4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	SEC14L2	O76054	403 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	TOP3B	O95985	862 aa	Known RBP	4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	PLG	P00747	810 aa	Predicted RBP	4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	MYZAP	P0CAP1	466 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	GPR89B	P0CG08	455 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	CBSL	P0DN79	551 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	ACTN1	P12814	892 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	CYBA	P13498	195 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	CSF2RA	P15509	400 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	CYP2B6	P20813	491 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	JAK1	P23458	1154 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	CHML	P26374	656 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	CCND3	P30281	292 aa	Predicted RBP	4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	TLX1	P31314	330 aa	Predicted RBP	4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	CBS	P35520	551 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	CPOX	P36551	454 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	RPL7A	P62424	266 aa	Known RBP	4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	KCNJ10	P78508	379 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	SLC18A2	Q05940	514 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	CETN1	Q12798	172 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	KIF5A	Q12840	1032 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	RALGDS	Q12967	914 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	CUL2	Q13617	745 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	FRG1	Q14331	258 aa	Known RBP	4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	NFE2L1	Q14494	772 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	PTGR1	Q14914	329 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	ETFDH	Q16134	617 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	PRTG	Q2VWP7	1150 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	SLC39A12	Q504Y0	691 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	BOLA3	Q53S33	107 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	AADACL4	Q5VUY2	407 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	GARNL3	Q5VVW2	1013 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	SHE	Q5VZ18	495 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	CENPP	Q6IPU0	288 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	CDC73	Q6P1J9	531 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	PPP1R21	Q6ZMI0	780 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	SLC16A12	Q6ZSM3	486 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	DENND5B	Q6ZUT9	1274 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	CCDC80	Q76M96	950 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	SZRD1	Q7Z422	152 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	RABEPK	Q7Z6M1	372 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	TDRP	Q86YL5	185 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	CADM3	Q8N126	398 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	TTC39C	Q8N584	583 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	SRBD1	Q8N5C6	995 aa	Known RBP	4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	ARFGAP1	Q8N6T3	406 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	TDRD5	Q8NAT2	981 aa	Known RBP	4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	SLC4A11	Q8NBS3	891 aa		4.06	□□□□□ -1.76
LRRC28-222	ENST00000561431	CNNM3	Q8NE01	707 aa		4.06	□□□□□ -1.76

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