RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 MYO1HQ8N1T3 1032 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 SDR16C5Q8N3Y7 309 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 SFRP1Q8N474 314 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 LMNTD1Q8N9Z9 388 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 OR5K2Q8NHB8 316 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 STAG3L4Q8TBR4 150 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 ATOH1Q92858 354 aaPredicted RBP9.13□□□□□ -0.95
HERC1-206ENST00000559996 C12orf66Q96MD2 445 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 PKP4Q99569 1192 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 STMN4Q9H169 189 aaPredicted RBP9.13□□□□□ -0.95
HERC1-206ENST00000559996 MRPL46Q9H2W6 279 aaKnown RBP9.13□□□□□ -0.95
HERC1-206ENST00000559996 OSGEPL1Q9H4B0 414 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 PARVBQ9HBI1 364 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 KCNK9Q9NPC2 374 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 CPSF2Q9P2I0 782 aaKnown RBP9.13□□□□□ -0.95
HERC1-206ENST00000559996 XPR1Q9UBH6 696 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 PTBP2Q9UKA9 531 aaKnown RBP9.13□□□□□ -0.95
HERC1-206ENST00000559996 OARD1Q9Y530 152 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 ASB1Q9Y576 335 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 U3KQA8 63 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 CUL9Q8IWT3 2517 aa9.13□□□□□ -0.95
HERC1-206ENST00000559996 LNP1A1A4G5 178 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 LRRC14BA6NHZ5 514 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 UBXN8O00124 270 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 MYO1CO00159 1063 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 TRIM38O00635 465 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 KHNYNO15037 678 aaKnown RBP9.12□□□□□ -0.95
HERC1-206ENST00000559996 TM9SF1O15321 606 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 PCDHGA12O60330 932 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 DFNA5O60443 496 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 C8GP07360 202 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 ERGP11308 486 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 MTHFD1P11586 935 aaKnown RBP9.12□□□□□ -0.95
HERC1-206ENST00000559996 VCLP18206 1134 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 ALDH3A1P30838 453 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 ARRB2P32121 409 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 HPDP32754 393 aaPredicted RBP9.12□□□□□ -0.95
HERC1-206ENST00000559996 RPIAP49247 311 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 IL9RQ01113 521 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 SF3A2Q15428 464 aaKnown RBP9.12□□□□□ -0.95
HERC1-206ENST00000559996 DEFB133Q30KQ1 61 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 SYTL3Q4VX76 610 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 FBXO48Q5FWF7 155 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.12□□□□□ -0.95
HERC1-206ENST00000559996 UNC5DQ6UXZ4 953 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 GKN2Q86XP6 184 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 TBC1D21Q8IYX1 336 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 PDPRQ8NCN5 879 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 FAM46DQ8NEK8 389 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 ARMC2Q8NEN0 867 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 CFAP61Q8NHU2 1237 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 SLC37A2Q8TED4 501 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 ZDHHC1Q8WTX9 485 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 RHBDF1Q96CC6 855 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 CAMK1GQ96NX5 476 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 TMEM79Q9BSE2 394 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 MECRQ9BV79 373 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 SLC40A1Q9NP59 571 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 NPDC1Q9NQX5 325 aaPredicted RBP9.12□□□□□ -0.95
HERC1-206ENST00000559996 DNAAF2Q9NVR5 837 aaKnown RBP9.12□□□□□ -0.95
HERC1-206ENST00000559996 COPG2Q9UBF2 871 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 CIDEBQ9UHD4 219 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 RALGAPA1Q6GYQ0 2036 aa9.12□□□□□ -0.95
HERC1-206ENST00000559996 FRYLO94915 3013 aa9.11□□□□□ -0.95
HERC1-206ENST00000559996 A0A1W2PPV9 198 aa9.11□□□□□ -0.95
HERC1-206ENST00000559996 A8MT66 165 aa9.11□□□□□ -0.95
HERC1-206ENST00000559996 PDZK1P1A8MUH7 402 aa9.11□□□□□ -0.95
HERC1-206ENST00000559996 FFAR2O15552 330 aa9.11□□□□□ -0.95
HERC1-206ENST00000559996 PRICKLE3O43900 615 aaPredicted RBP9.11□□□□□ -0.95
HERC1-206ENST00000559996 ZWINTO95229 277 aa9.11□□□□□ -0.95
HERC1-206ENST00000559996 LMNAP02545 664 aaKnown RBP9.11□□□□□ -0.95
HERC1-206ENST00000559996 BPGMP07738 259 aa9.11□□□□□ -0.95
HERC1-206ENST00000559996 SYPP08247 313 aa9.11□□□□□ -0.95
HERC1-206ENST00000559996 ENO2P09104 434 aaPredicted RBP9.11□□□□□ -0.95
HERC1-206ENST00000559996 ZNF883P0CG24 379 aa9.11□□□□□ -0.95
HERC1-206ENST00000559996 FGF3P11487 239 aaPredicted RBP9.11□□□□□ -0.95
HERC1-206ENST00000559996 MYF5P13349 255 aa9.11□□□□□ -0.95
HERC1-206ENST00000559996 CPA3P15088 417 aa9.11□□□□□ -0.95
HERC1-206ENST00000559996 CHN1P15882 459 aa9.11□□□□□ -0.95
HERC1-206ENST00000559996 NR1D1P20393 614 aa9.11□□□□□ -0.95
HERC1-206ENST00000559996 IMPA1P29218 277 aa9.11□□□□□ -0.95
HERC1-206ENST00000559996 GGT5P36269 586 aa9.11□□□□□ -0.95
HERC1-206ENST00000559996 AGTR2P50052 363 aa9.11□□□□□ -0.95
HERC1-206ENST00000559996 MAZP56270 477 aaKnown RBP9.11□□□□□ -0.95
HERC1-206ENST00000559996 SPEM2Q0P670 501 aa9.11□□□□□ -0.95
HERC1-206ENST00000559996 PRKG2Q13237 762 aa9.11□□□□□ -0.95
HERC1-206ENST00000559996 SP140Q13342 867 aa9.11□□□□□ -0.95
HERC1-206ENST00000559996 FASTKQ14296 549 aaKnown RBP9.11□□□□□ -0.95
HERC1-206ENST00000559996 CDKL4Q5MAI5 379 aa9.11□□□□□ -0.95
HERC1-206ENST00000559996 IL27RAQ6UWB1 636 aa9.11□□□□□ -0.95
HERC1-206ENST00000559996 ZYG11AQ6WRX3 759 aa9.11□□□□□ -0.95
HERC1-206ENST00000559996 RPS27LQ71UM5 84 aaKnown RBP9.11□□□□□ -0.95
HERC1-206ENST00000559996 ADAMTSL2Q86TH1 951 aa9.11□□□□□ -0.95
HERC1-206ENST00000559996 GPSM1Q86YR5 675 aa9.11□□□□□ -0.95
HERC1-206ENST00000559996 C10orf107Q8IVU9 208 aa9.11□□□□□ -0.95
HERC1-206ENST00000559996 KLHDC8AQ8IYD2 350 aa9.11□□□□□ -0.95
HERC1-206ENST00000559996 ARL14Q8N4G2 192 aa9.11□□□□□ -0.95
HERC1-206ENST00000559996 MINDY1Q8N5J2 469 aa9.11□□□□□ -0.95
HERC1-206ENST00000559996 GOLGA6L1Q8N7Z2 621 aa9.11□□□□□ -0.95
HERC1-206ENST00000559996 LINC01555Q8NAE3 123 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms