RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 FAM91A1Q658Y4 838 aa13.97□□□□□ -0.17
TRAPPC6B-206ENST00000556765 IGF2-ASQ6U949 168 aa13.97□□□□□ -0.17
TRAPPC6B-206ENST00000556765 CLEC18BQ6UXF7 455 aa13.97□□□□□ -0.17
TRAPPC6B-206ENST00000556765 ADAMTSL2Q86TH1 951 aa13.97□□□□□ -0.17
TRAPPC6B-206ENST00000556765 TSPAN33Q86UF1 283 aa13.97□□□□□ -0.17
TRAPPC6B-206ENST00000556765 OXR1Q8N573 874 aa13.97□□□□□ -0.17
TRAPPC6B-206ENST00000556765 CLEC18CQ8NCF0 446 aa13.97□□□□□ -0.17
TRAPPC6B-206ENST00000556765 GPR26Q8NDV2 337 aa13.97□□□□□ -0.17
TRAPPC6B-206ENST00000556765 L3HYPDHQ96EM0 354 aa13.97□□□□□ -0.17
TRAPPC6B-206ENST00000556765 VPS35Q96QK1 796 aa13.97□□□□□ -0.17
TRAPPC6B-206ENST00000556765 GPR21Q99679 349 aa13.97□□□□□ -0.17
TRAPPC6B-206ENST00000556765 GATA5Q9BWX5 397 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC6B-206ENST00000556765 HDAC8Q9BY41 377 aa13.97□□□□□ -0.17
TRAPPC6B-206ENST00000556765 FAM83DQ9H4H8 585 aa13.97□□□□□ -0.17
TRAPPC6B-206ENST00000556765 CPSF2Q9P2I0 782 aaKnown RBP13.97□□□□□ -0.17
TRAPPC6B-206ENST00000556765 A0A1W2PR77 199 aa13.96□□□□□ -0.17
TRAPPC6B-206ENST00000556765 KPNA3O00505 521 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC6B-206ENST00000556765 SIGLEC6O43699 453 aa13.96□□□□□ -0.17
TRAPPC6B-206ENST00000556765 ADH1BP00325 375 aa13.96□□□□□ -0.17
TRAPPC6B-206ENST00000556765 F7P08709 466 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC6B-206ENST00000556765 SBK3P0C264 359 aa13.96□□□□□ -0.17
TRAPPC6B-206ENST00000556765 CHRM3P20309 590 aa13.96□□□□□ -0.17
TRAPPC6B-206ENST00000556765 IMPDH1P20839 514 aa13.96□□□□□ -0.17
TRAPPC6B-206ENST00000556765 DGKAP23743 735 aa13.96□□□□□ -0.17
TRAPPC6B-206ENST00000556765 RBMS1P29558 406 aaKnown RBP13.96□□□□□ -0.17
TRAPPC6B-206ENST00000556765 MAPK9P45984 424 aa13.96□□□□□ -0.17
TRAPPC6B-206ENST00000556765 RASSF2P50749 326 aa13.96□□□□□ -0.17
TRAPPC6B-206ENST00000556765 NXPH1P58417 271 aa13.96□□□□□ -0.17
TRAPPC6B-206ENST00000556765 RPS14P62263 151 aaKnown RBP13.96□□□□□ -0.17
TRAPPC6B-206ENST00000556765 DAB2P98082 770 aa13.96□□□□□ -0.17
TRAPPC6B-206ENST00000556765 TIAL1Q01085 375 aaKnown RBP eCLIP13.96□□□□□ -0.17
TRAPPC6B-206ENST00000556765 LDLRAP1Q5SW96 308 aa13.96□□□□□ -0.17
TRAPPC6B-206ENST00000556765 METTL2BQ6P1Q9 378 aaKnown RBP13.96□□□□□ -0.17
TRAPPC6B-206ENST00000556765 ZCCHC23Q6ZST2 131 aa13.96□□□□□ -0.17
TRAPPC6B-206ENST00000556765 PARS2Q7L3T8 475 aaKnown RBP13.96□□□□□ -0.17
TRAPPC6B-206ENST00000556765 ISCA2Q86U28 154 aa13.96□□□□□ -0.17
TRAPPC6B-206ENST00000556765 CD200R1Q8TD46 325 aa13.96□□□□□ -0.17
TRAPPC6B-206ENST00000556765 EXTL1Q92935 676 aa13.96□□□□□ -0.17
TRAPPC6B-206ENST00000556765 SMIM14Q96QK8 99 aa13.96□□□□□ -0.17
TRAPPC6B-206ENST00000556765 TMEM120AQ9BXJ8 343 aa13.96□□□□□ -0.17
TRAPPC6B-206ENST00000556765 EBF2Q9HAK2 575 aa13.96□□□□□ -0.17
TRAPPC6B-206ENST00000556765 TXLNGQ9NUQ3 528 aa13.96□□□□□ -0.17
TRAPPC6B-206ENST00000556765 SPATS2LQ9NUQ6 558 aaKnown RBP13.96□□□□□ -0.17
TRAPPC6B-206ENST00000556765 MED16Q9Y2X0 877 aa13.96□□□□□ -0.17
TRAPPC6B-206ENST00000556765 ICE1Q9Y2F5 2266 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 PIKFYVEQ9Y2I7 2098 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 A0A0G2JND7 137 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 A8MT66 165 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 STX16-NPEPL1H3BU86 382 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 TLR4O00206 839 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 TRIM38O00635 465 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 STX16O14662 325 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 WNT9AO14904 365 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 AP1G1O43747 822 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 GSTM1P09488 218 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 FAM87AP0C7U9 286 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 SFTPCP11686 197 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 CDKN1CP49918 316 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 CLCN7P51798 805 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 GSTM4Q03013 218 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 OVGP1Q12889 678 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 CLN3Q13286 438 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 TMEM52BQ4KMG9 183 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 C3orf38Q5JPI3 329 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 CDKL4Q5MAI5 379 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 HENMT1Q5T8I9 393 aaKnown RBP13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 PAQR3Q6TCH7 311 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 TMEM207Q6UWW9 146 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 PIM3Q86V86 326 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 ZNF366Q8N895 744 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 DDHD1Q8NEL9 900 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 ANKRD49Q8WVL7 239 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 DCUN1D1Q96GG9 259 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 CCNL2Q96S94 520 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 ATOH8Q96SQ7 321 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 SORT1Q99523 831 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 SPATA16Q9BXB7 569 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 ZCCHC2Q9C0B9 1178 aaKnown RBP13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 ALG9Q9H6U8 611 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 ERVMER34-1Q9H9K5 563 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 SAR1AQ9NR31 198 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 RNF112Q9ULX5 631 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 SATB2Q9UPW6 733 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 DNAJC16Q9Y2G8 782 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 STK38LQ9Y2H1 464 aa13.95□□□□□ -0.18
TRAPPC6B-206ENST00000556765 GOLGA8QA0A0J9YX86 632 aa13.94□□□□□ -0.18
TRAPPC6B-206ENST00000556765 BLACEA4D250 179 aa13.94□□□□□ -0.18
TRAPPC6B-206ENST00000556765 GOLGA8OA6NCC3 632 aa13.94□□□□□ -0.18
TRAPPC6B-206ENST00000556765 GOLGA8NF8WBI6 632 aa13.94□□□□□ -0.18
TRAPPC6B-206ENST00000556765 ZBTB14O43829 449 aa13.94□□□□□ -0.18
TRAPPC6B-206ENST00000556765 OR1I1O60431 355 aa13.94□□□□□ -0.18
TRAPPC6B-206ENST00000556765 FTH1P02794 183 aa13.94□□□□□ -0.18
TRAPPC6B-206ENST00000556765 ITGB2P05107 769 aa13.94□□□□□ -0.18
TRAPPC6B-206ENST00000556765 PRSS56P0CW18 603 aa13.94□□□□□ -0.18
TRAPPC6B-206ENST00000556765 ADRB3P13945 408 aa13.94□□□□□ -0.18
TRAPPC6B-206ENST00000556765 RPL14P50914 215 aaKnown RBP13.94□□□□□ -0.18
TRAPPC6B-206ENST00000556765 NAGLUP54802 743 aa13.94□□□□□ -0.18
TRAPPC6B-206ENST00000556765 INHBCP55103 352 aa13.94□□□□□ -0.18
TRAPPC6B-206ENST00000556765 HERVK_113P63132 956 aa13.94□□□□□ -0.18
TRAPPC6B-206ENST00000556765 SFSWAPQ12872 951 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms