RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 SLC35F3Q8IY50 421 aa15.03■□□□□ -0
DDB1-216ENST00000539739 KYQ8NBH2 561 aa15.03■□□□□ -0
DDB1-216ENST00000539739 PHC3Q8NDX5 983 aa15.03■□□□□ -0
DDB1-216ENST00000539739 OR5K2Q8NHB8 316 aa15.03■□□□□ -0
DDB1-216ENST00000539739 KCTD4Q8WVF5 259 aa15.03■□□□□ -0
DDB1-216ENST00000539739 ZFPM2Q8WW38 1151 aa15.03■□□□□ -0
DDB1-216ENST00000539739 SH3KBP1Q96B97 665 aa15.03■□□□□ -0
DDB1-216ENST00000539739 NXNL1Q96CM4 212 aa15.03■□□□□ -0
DDB1-216ENST00000539739 SENP1Q9P0U3 644 aa15.03■□□□□ -0
DDB1-216ENST00000539739 PADI4Q9UM07 663 aa15.03■□□□□ -0
DDB1-216ENST00000539739 RUVBL2Q9Y230 463 aaKnown RBP15.03■□□□□ -0
DDB1-216ENST00000539739 FAM186AA6NE01 2351 aa15.03■□□□□ -0
DDB1-216ENST00000539739 ARID1BQ8NFD5 2236 aaPredicted RBP15.03■□□□□ -0
DDB1-216ENST00000539739 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.03■□□□□ -0
DDB1-216ENST00000539739 GFYI3L273 518 aa15.03■□□□□ -0
DDB1-216ENST00000539739 GOLGA8RI6L899 631 aa15.03■□□□□ -0
DDB1-216ENST00000539739 BTN3A1O00481 513 aa15.03■□□□□ -0
DDB1-216ENST00000539739 PSIP1O75475 530 aaKnown RBP15.03■□□□□ -0
DDB1-216ENST00000539739 C1orf105O95561 183 aa15.03■□□□□ -0
DDB1-216ENST00000539739 LDOC1O95751 146 aaPredicted RBP15.03■□□□□ -0
DDB1-216ENST00000539739 CD1DP15813 335 aa15.03■□□□□ -0
DDB1-216ENST00000539739 KRT4P19013 534 aa15.03■□□□□ -0
DDB1-216ENST00000539739 CYP2A7P20853 494 aa15.03■□□□□ -0
DDB1-216ENST00000539739 FASLGP48023 281 aa15.03■□□□□ -0
DDB1-216ENST00000539739 KPNA2P52292 529 aaKnown RBP15.03■□□□□ -0
DDB1-216ENST00000539739 LIMK1P53667 647 aa15.03■□□□□ -0
DDB1-216ENST00000539739 MAZP56270 477 aaKnown RBP15.03■□□□□ -0
DDB1-216ENST00000539739 UBE2IP63279 158 aaKnown RBP15.03■□□□□ -0
DDB1-216ENST00000539739 DAB2P98082 770 aa15.03■□□□□ -0
DDB1-216ENST00000539739 IRF9Q00978 393 aa15.03■□□□□ -0
DDB1-216ENST00000539739 ADAMTSL2Q86TH1 951 aa15.03■□□□□ -0
DDB1-216ENST00000539739 LCA5Q86VQ0 697 aa15.03■□□□□ -0
DDB1-216ENST00000539739 NAXDQ8IW45 347 aa15.03■□□□□ -0
DDB1-216ENST00000539739 DCUN1D3Q8IWE4 304 aa15.03■□□□□ -0
DDB1-216ENST00000539739 SFTPA2Q8IWL1 248 aa15.03■□□□□ -0
DDB1-216ENST00000539739 SRRM1Q8IYB3 904 aaKnown RBP15.03■□□□□ -0
DDB1-216ENST00000539739 SPATA6LQ8N4H0 392 aa15.03■□□□□ -0
DDB1-216ENST00000539739 DRAXINQ8NBI3 349 aaPredicted RBP15.03■□□□□ -0
DDB1-216ENST00000539739 OR5AR1Q8NGP9 310 aa15.03■□□□□ -0
DDB1-216ENST00000539739 MCOLN3Q8TDD5 553 aa15.03■□□□□ -0
DDB1-216ENST00000539739 ZNF483Q8TF39 744 aaPredicted RBP15.03■□□□□ -0
DDB1-216ENST00000539739 TRIM54Q9BYV2 358 aa15.03■□□□□ -0
DDB1-216ENST00000539739 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.03■□□□□ -0
DDB1-216ENST00000539739 SLC40A1Q9NP59 571 aa15.03■□□□□ -0
DDB1-216ENST00000539739 IGSF5Q9NSI5 407 aa15.03■□□□□ -0
DDB1-216ENST00000539739 BTBD3Q9Y2F9 522 aa15.03■□□□□ -0
DDB1-216ENST00000539739 GOLGA4Q13439 2230 aaKnown RBP15.02■□□□□ -0
DDB1-216ENST00000539739 WDR87Q6ZQQ6 2873 aa15.02■□□□□ -0
DDB1-216ENST00000539739 RHPN2P1A8MT19 583 aa15.02□□□□□ -0.01
DDB1-216ENST00000539739 NUDT21O43809 227 aaKnown RBP15.02□□□□□ -0.01
DDB1-216ENST00000539739 SH3BP5O60239 455 aa15.02□□□□□ -0.01
DDB1-216ENST00000539739 OPA1O60313 960 aa15.02□□□□□ -0.01
DDB1-216ENST00000539739 GSTA1P08263 222 aa15.02□□□□□ -0.01
DDB1-216ENST00000539739 HIST1H2AGP0C0S8 130 aaPredicted RBP15.02□□□□□ -0.01
DDB1-216ENST00000539739 GLB1P16278 677 aa15.02□□□□□ -0.01
DDB1-216ENST00000539739 HIST1H2ADP20671 130 aa15.02□□□□□ -0.01
DDB1-216ENST00000539739 CCT5P48643 541 aa15.02□□□□□ -0.01
DDB1-216ENST00000539739 DLG1Q12959 904 aa15.02□□□□□ -0.01
DDB1-216ENST00000539739 ACAP2Q15057 778 aa15.02□□□□□ -0.01
DDB1-216ENST00000539739 DUS1LQ6P1R4 473 aaKnown RBP15.02□□□□□ -0.01
DDB1-216ENST00000539739 KIAA2013Q8IYS2 634 aa15.02□□□□□ -0.01
DDB1-216ENST00000539739 CENPLQ8N0S6 344 aaPredicted RBP15.02□□□□□ -0.01
DDB1-216ENST00000539739 RAD51AP1Q96B01 352 aa15.02□□□□□ -0.01
DDB1-216ENST00000539739 HIST1H2AHQ96KK5 128 aa15.02□□□□□ -0.01
DDB1-216ENST00000539739 CNDP2Q96KP4 475 aaKnown RBP15.02□□□□□ -0.01
DDB1-216ENST00000539739 SMC6Q96SB8 1091 aa15.02□□□□□ -0.01
DDB1-216ENST00000539739 HIST1H2AJQ99878 128 aa15.02□□□□□ -0.01
DDB1-216ENST00000539739 H2AFJQ9BTM1 129 aa15.02□□□□□ -0.01
DDB1-216ENST00000539739 SLC12A9Q9BXP2 914 aa15.02□□□□□ -0.01
DDB1-216ENST00000539739 UNKQ9C0B0 810 aaKnown RBP15.02□□□□□ -0.01
DDB1-216ENST00000539739 KIR3DX1Q9H7L2 352 aa15.02□□□□□ -0.01
DDB1-216ENST00000539739 PARVBQ9HBI1 364 aa15.02□□□□□ -0.01
DDB1-216ENST00000539739 TMBIM4Q9HC24 238 aa15.02□□□□□ -0.01
DDB1-216ENST00000539739 FTSJ1Q9UET6 329 aa15.02□□□□□ -0.01
DDB1-216ENST00000539739 DCDC2Q9UHG0 476 aa15.02□□□□□ -0.01
DDB1-216ENST00000539739 NOVA2Q9UNW9 492 aaKnown RBP15.02□□□□□ -0.01
DDB1-216ENST00000539739 TDRKHQ9Y2W6 561 aaKnown RBP15.02□□□□□ -0.01
DDB1-216ENST00000539739 PTPRZ1P23471 2315 aaPredicted RBP15.01□□□□□ -0.01
DDB1-216ENST00000539739 NPEPPSL1A6NEC2 478 aa15.01□□□□□ -0.01
DDB1-216ENST00000539739 FOXO6A8MYZ6 492 aa15.01□□□□□ -0.01
DDB1-216ENST00000539739 AGPSO00116 658 aa15.01□□□□□ -0.01
DDB1-216ENST00000539739 CDC7O00311 574 aa15.01□□□□□ -0.01
DDB1-216ENST00000539739 COPEO14579 308 aa15.01□□□□□ -0.01
DDB1-216ENST00000539739 ZW10O43264 779 aa15.01□□□□□ -0.01
DDB1-216ENST00000539739 ENO2P09104 434 aaPredicted RBP15.01□□□□□ -0.01
DDB1-216ENST00000539739 TFEBP19484 476 aa15.01□□□□□ -0.01
DDB1-216ENST00000539739 GMPRP36959 345 aa15.01□□□□□ -0.01
DDB1-216ENST00000539739 RPS6KA3P51812 740 aa15.01□□□□□ -0.01
DDB1-216ENST00000539739 PRKG2Q13237 762 aa15.01□□□□□ -0.01
DDB1-216ENST00000539739 TSNQ15631 228 aaKnown RBP15.01□□□□□ -0.01
DDB1-216ENST00000539739 PROX2Q3B8N5 592 aa15.01□□□□□ -0.01
DDB1-216ENST00000539739 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.01□□□□□ -0.01
DDB1-216ENST00000539739 FRA10AC1Q70Z53 315 aa15.01□□□□□ -0.01
DDB1-216ENST00000539739 CLEC14AQ86T13 490 aa15.01□□□□□ -0.01
DDB1-216ENST00000539739 C4orf33Q8N1A6 199 aa15.01□□□□□ -0.01
DDB1-216ENST00000539739 RAB42Q8N4Z0 105 aa15.01□□□□□ -0.01
DDB1-216ENST00000539739 FBXO15Q8NCQ5 510 aaPredicted RBP15.01□□□□□ -0.01
DDB1-216ENST00000539739 STAG3L4Q8TBR4 150 aa15.01□□□□□ -0.01
DDB1-216ENST00000539739 NETO1Q8TDF5 533 aa15.01□□□□□ -0.01
DDB1-216ENST00000539739 NAT6Q93015 286 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 736.6 ms