RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 TBL1XR1Q9BZK7 514 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 RSL24D1Q9UHA3 163 aaKnown RBP15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 ANKRD66B4E2M5 251 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 PCDH7O60245 1069 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 DUSP3P51452 185 aaPredicted RBP15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 ZNF33AQ06730 810 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 PCDH1Q08174 1060 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 GRM2Q14416 872 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 MYBPC3Q14896 1274 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 SLC8B1Q6J4K2 584 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 KBTBD6Q86V97 674 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 DUSP26Q9BV47 211 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 SPATA9Q9BWV2 254 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 COMMD3-BMI1R4GMX3 469 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 KDELR3O43731 214 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 MMP20O60882 483 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 CBSLP0DN79 551 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 CYP4B1P13584 511 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 SLC7A1P30825 629 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 CBSP35520 551 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 LBX1P52954 281 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 PIK3R6Q5UE93 754 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 NCBP2-AS2Q69YL0 99 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 SLC30A8Q8IWU4 369 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 TFGQ92734 400 aaPredicted RBP15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 RBM4BQ9BQ04 359 aaKnown RBP15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 RBM4Q9BWF3 364 aaKnown RBP15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 FADS3Q9Y5Q0 445 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 PIP5K1BO14986 540 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 GSTT1P30711 240 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 ACVRL1P37023 503 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 LSM3P62310 102 aaKnown RBP15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 INCA1Q0VD86 236 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 SNED1Q8TER0 1413 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 FETUBQ9UGM5 382 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 AK5Q9Y6K8 562 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 HAS3O00219 553 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 MAN2B1O00754 1011 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 LIN7AO14910 233 aaPredicted RBP15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 AGR2O95994 175 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 PTX3P26022 381 aaPredicted RBP15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 SGCBQ16585 318 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 RNF19BQ6ZMZ0 732 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 ADGRG6Q86SQ4 1221 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 LMX1AQ8TE12 382 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 KIAA1143Q96AT1 154 aaPredicted RBP15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 SMOQ99835 787 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 FAM83CQ9BQN1 747 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 A0A0J9YVX5 310 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 TNFRSF21O75509 655 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 TIPRLO75663 272 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 QPRTQ15274 297 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 MTX3Q5HYI7 312 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 DENND5AQ6IQ26 1287 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 SNX33Q8WV41 574 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 ROPN1LQ96C74 230 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 CRELD1Q96HD1 420 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 PLEKHA1Q9HB21 404 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 CRTAC1Q9NQ79 661 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 ZCCHC3Q9NUD5 404 aaKnown RBP15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 CCDC182A6NF36 153 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 METTL18O95568 372 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 CYB5AP00167 134 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 TGFBR2P37173 567 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 PYDC2Q56P42 97 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 SIRPB2Q5JXA9 342 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 MAMDC4Q6UXC1 1216 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 LRRC70Q7Z2Q7 622 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 RNF31Q96EP0 1072 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 PLGRKTQ9HBL7 147 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 SUSD2Q9UGT4 822 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 RAPGEFL1Q9UHV5 662 aa15.94■□□□□ 0.14
PCDHA3-201ENST00000522353 PLGP00747 810 aaPredicted RBP15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 IGFBP5P24593 272 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 SLC35B2Q8TB61 432 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 ZNF483Q8TF39 744 aaPredicted RBP15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 SLC13A3Q8WWT9 602 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 RFKQ969G6 155 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 CMTM7Q96FZ5 175 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 PLEKHG4BQ96PX9 1271 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 ALG2Q9H553 416 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 S100A14Q9HCY8 104 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 TMEM138Q9NPI0 162 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 C19orf25Q9UFG5 118 aaPredicted RBP15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 ZNF623O75123 536 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 NIPSNAP2O75323 286 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 RHOP08100 348 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 SRPRAP08240 638 aaKnown RBP15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 ALOX5P09917 674 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 ZNF823P16415 610 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 NCBP2P52298 156 aaKnown RBP eCLIP15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 PAQR3Q6TCH7 311 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 HFE2Q6ZVN8 426 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 ZNF527Q8NB42 609 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 SMPDL3BQ92485 455 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 DGAT2Q96PD7 388 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 NEUROD4Q9HD90 331 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 MOCS1Q9NZB8 636 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 A0A1W2PRB8 838 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 VSTM5A8MXK1 200 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms