RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.57□□□□□ -0.24
SYNPO-205ENST00000522122 ZIM2Q9NZV7 527 aa13.57□□□□□ -0.24
SYNPO-205ENST00000522122 FAM240BA0A1B0GVZ2 78 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 SEPT4O43236 478 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 MPZL2O60487 215 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 GLDCP23378 1020 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 EDNRBP24530 442 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 CDH15P55291 814 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 FAM220AQ7Z4H9 259 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 OSTM1Q86WC4 334 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 C2orf73Q8N5S3 287 aaPredicted RBP13.56□□□□□ -0.24
SYNPO-205ENST00000522122 ARL14EPQ8N8R7 260 aaPredicted RBP13.56□□□□□ -0.24
SYNPO-205ENST00000522122 SLC2A13Q96QE2 648 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 LMAN2LQ9H0V9 348 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 ACTR3BQ9P1U1 418 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 CD84Q9UIB8 345 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 H3BNH8 94 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 J3KR12 359 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 PLOD3O60568 738 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 RBM48Q5RL73 367 aaKnown RBP13.56□□□□□ -0.24
SYNPO-205ENST00000522122 HACD2Q6Y1H2 254 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 COMMD2Q86X83 199 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 CFAP206Q8IYR0 622 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 MOSPD2Q8NHP6 518 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 ING4Q9UNL4 249 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 ZNF99A8MXY4 864 aaPredicted RBP13.56□□□□□ -0.24
SYNPO-205ENST00000522122 ONECUT3O60422 494 aaPredicted RBP13.56□□□□□ -0.24
SYNPO-205ENST00000522122 ADH1CP00326 375 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 LAG3P18627 525 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 PNLIPRP1P54315 467 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 IFI44LQ53G44 452 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 SNX20Q7Z614 316 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 PHYKPLQ8IUZ5 450 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 RERGQ96A58 199 aaPredicted RBP13.56□□□□□ -0.24
SYNPO-205ENST00000522122 TSGA13Q96PP4 275 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 WDR83Q9BRX9 315 aaKnown RBP13.56□□□□□ -0.24
SYNPO-205ENST00000522122 COPS4Q9BT78 406 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 NDUFB5O43674 189 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 SSNA1O43805 119 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 AMD1P17707 334 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 EFNA1P20827 205 aaPredicted RBP13.56□□□□□ -0.24
SYNPO-205ENST00000522122 PTX3P26022 381 aaPredicted RBP13.56□□□□□ -0.24
SYNPO-205ENST00000522122 HTR1BP28222 390 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 HMGCS1Q01581 520 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 LGALS3BPQ08380 585 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 GPR33Q49SQ1 333 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 TMEM199Q8N511 208 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 TXNDC5Q8NBS9 432 aaKnown RBP13.56□□□□□ -0.24
SYNPO-205ENST00000522122 ZNF420Q8TAQ5 688 aaPredicted RBP13.56□□□□□ -0.24
SYNPO-205ENST00000522122 C2orf15Q8WU43 125 aaKnown RBP13.56□□□□□ -0.24
SYNPO-205ENST00000522122 ING3Q9NXR8 418 aa13.56□□□□□ -0.24
SYNPO-205ENST00000522122 IL4RP24394 825 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 CCR3P51677 355 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 MAPK12P53778 367 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 BNC1Q01954 994 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 NOGQ13253 232 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 ZBTB6Q15916 424 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 ZNF730Q6ZMV8 503 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 FBXO22Q8NEZ5 403 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 C12orf43Q96C57 262 aaKnown RBP13.55□□□□□ -0.24
SYNPO-205ENST00000522122 ISOC1Q96CN7 298 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 RPL10LQ96L21 214 aaKnown RBP13.55□□□□□ -0.24
SYNPO-205ENST00000522122 SMOQ99835 787 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 IGFLR1Q9H665 355 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 RPRD1BQ9NQG5 326 aaKnown RBP13.55□□□□□ -0.24
SYNPO-205ENST00000522122 CCDC177Q9NQR7 707 aaPredicted RBP13.55□□□□□ -0.24
SYNPO-205ENST00000522122 PHF24Q9UPV7 400 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 PEX16Q9Y5Y5 336 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 HS3ST4Q9Y661 456 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 FAM86C2PA6NEL3 165 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 GLTPD2A6NH11 291 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 ENPP3O14638 875 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 MYCLP1P12525 358 aaPredicted RBP13.55□□□□□ -0.24
SYNPO-205ENST00000522122 ALDH4A1P30038 563 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 ACLYP53396 1101 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 LAPTM5Q13571 262 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 SLC9A5Q14940 896 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 CHST9Q7L1S5 443 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 TRIM74Q86UV6 250 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 TRIM73Q86UV7 250 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 PIM3Q86V86 326 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 NPAS4Q8IUM7 802 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 ANKFN1Q8N957 763 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 SLC43A3Q8NBI5 491 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 PHC3Q8NDX5 983 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 EXOSC8Q96B26 276 aaKnown RBP13.55□□□□□ -0.24
SYNPO-205ENST00000522122 DIRAS2Q96HU8 199 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 DEC1Q9P2X7 70 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 ADAMTS5Q9UNA0 930 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 STRCQ7RTU9 1775 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 TTC24A2A3L6 582 aaPredicted RBP13.55□□□□□ -0.24
SYNPO-205ENST00000522122 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.55□□□□□ -0.24
SYNPO-205ENST00000522122 H7C0S8 307 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 AGRPO00253 132 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 AP2A2O94973 939 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 SLC35E2BP0CK96 405 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 IL18R1Q13478 541 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 SRFBP1Q8NEF9 429 aaKnown RBP13.55□□□□□ -0.24
SYNPO-205ENST00000522122 RAD51AP1Q96B01 352 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 SUSD3Q96L08 255 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms