RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 COX15Q7KZN9 410 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 DET1Q7L5Y6 550 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 DAAM2Q86T65 1068 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 CPNE8Q86YQ8 564 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 CFAP206Q8IYR0 622 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 GPR135Q8IZ08 494 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 DNAJC22Q8N4W6 341 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 SPATA22Q8NHS9 363 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.76□□□□□ -0.69
RNF4-218ENST00000513284 HAS2Q92819 552 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 ZNF670Q9BS34 389 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 CEP41Q9BYV8 373 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 CHRNA10Q9GZZ6 450 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 DEF6Q9H4E7 631 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 TFB2MQ9H5Q4 396 aaKnown RBP10.76□□□□□ -0.69
RNF4-218ENST00000513284 ACTR10Q9NZ32 417 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 IL17CQ9P0M4 197 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 ABI3Q9P2A4 366 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 TNFRSF10DQ9UBN6 386 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 FAM8A1Q9UBU6 413 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 TINAGQ9UJW2 476 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 CDC23Q9UJX2 597 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 ZNF835Q9Y2P0 537 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 VPS13CQ709C8 3753 aa10.75□□□□□ -0.69
RNF4-218ENST00000513284 ZSCAN9O15535 394 aaPredicted RBP10.75□□□□□ -0.69
RNF4-218ENST00000513284 SLC19A2O60779 497 aa10.75□□□□□ -0.69
RNF4-218ENST00000513284 F10P00742 488 aa10.75□□□□□ -0.69
RNF4-218ENST00000513284 TPBGLP0DKB5 382 aa10.75□□□□□ -0.69
RNF4-218ENST00000513284 NDUFS1P28331 727 aa10.75□□□□□ -0.69
RNF4-218ENST00000513284 SOX11P35716 441 aa10.75□□□□□ -0.69
RNF4-218ENST00000513284 IFI35P80217 286 aaPredicted RBP10.75□□□□□ -0.69
RNF4-218ENST00000513284 GSE1Q14687 1217 aa10.75□□□□□ -0.69
RNF4-218ENST00000513284 PTPRCAPQ14761 206 aa10.75□□□□□ -0.69
RNF4-218ENST00000513284 PDK2Q15119 407 aa10.75□□□□□ -0.69
RNF4-218ENST00000513284 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.75□□□□□ -0.69
RNF4-218ENST00000513284 ZNF658BQ4V348 819 aaPredicted RBP10.75□□□□□ -0.69
RNF4-218ENST00000513284 FAM151BQ6UXP7 276 aa10.75□□□□□ -0.69
RNF4-218ENST00000513284 TGIF2LYQ8IUE0 185 aa10.75□□□□□ -0.69
RNF4-218ENST00000513284 C19orf47Q8N9M1 422 aaKnown RBP10.75□□□□□ -0.69
RNF4-218ENST00000513284 KCTD6Q8NC69 237 aa10.75□□□□□ -0.69
RNF4-218ENST00000513284 OR52E1Q8NGJ3 308 aa10.75□□□□□ -0.69
RNF4-218ENST00000513284 CHTF18Q8WVB6 975 aa10.75□□□□□ -0.69
RNF4-218ENST00000513284 NRGNQ92686 78 aa10.75□□□□□ -0.69
RNF4-218ENST00000513284 LINC00615Q96LM1 132 aaPredicted RBP10.75□□□□□ -0.69
RNF4-218ENST00000513284 OR2A14Q96R47 310 aa10.75□□□□□ -0.69
RNF4-218ENST00000513284 FERD3LQ96RJ6 166 aa10.75□□□□□ -0.69
RNF4-218ENST00000513284 THAP2Q9H0W7 228 aa10.75□□□□□ -0.69
RNF4-218ENST00000513284 CXXC4Q9H2H0 198 aa10.75□□□□□ -0.69
RNF4-218ENST00000513284 PCDHGB6Q9Y5F9 930 aa10.75□□□□□ -0.69
RNF4-218ENST00000513284 GOLGA6L19H0YKK7 550 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 ZNHIT1O43257 154 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 BUD23O43709 281 aaKnown RBP10.74□□□□□ -0.69
RNF4-218ENST00000513284 NDST3O95803 873 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 ALBP02768 609 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 TPM3P06753 285 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 SLC35G4P0C7Q5 338 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 ALAS2P22557 587 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 DNAJA1P31689 397 aaKnown RBP10.74□□□□□ -0.69
RNF4-218ENST00000513284 SMSP52788 366 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 IST1P53990 364 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 ARG2P78540 354 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 ZBED6P86452 979 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 KRT33BQ14525 404 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 NR1I3Q14994 352 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 TUBB8Q3ZCM7 444 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 E4F1Q66K89 784 aaPredicted RBP10.74□□□□□ -0.69
RNF4-218ENST00000513284 CAVIN1Q6NZI2 390 aaKnown RBP10.74□□□□□ -0.69
RNF4-218ENST00000513284 ALKBH5Q6P6C2 394 aaKnown RBP10.74□□□□□ -0.69
RNF4-218ENST00000513284 TLDC1Q6P9B6 456 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 SPESP1Q6UW49 350 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 MEX3BQ6ZN04 569 aaKnown RBP10.74□□□□□ -0.69
RNF4-218ENST00000513284 NT5DC3Q86UY8 548 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 AMIGO1Q86WK6 493 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 DTWD1Q8N5C7 304 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 CCNYQ8ND76 341 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 DNAJB8Q8NHS0 232 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 MDFIQ99750 246 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 SLC25A51Q9H1U9 297 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 SLC26A1Q9H2B4 701 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 OR52A5Q9H2C5 316 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 SOX17Q9H6I2 414 aaPredicted RBP10.74□□□□□ -0.69
RNF4-218ENST00000513284 WDR54Q9H977 334 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 CBX8Q9HC52 389 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 DLL4Q9NR61 685 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 SPHK1Q9NYA1 384 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 PTGFRNQ9P2B2 879 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 UVRAGQ9P2Y5 699 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 RPH3AQ9Y2J0 694 aaPredicted RBP10.74□□□□□ -0.69
RNF4-218ENST00000513284 MEMO1Q9Y316 297 aa10.74□□□□□ -0.69
RNF4-218ENST00000513284 TRAV17A0A0B4J275 112 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 LOC285095A0A1B0GVY8 99 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 VSTM2BA6NLU5 285 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 C2orf74A8MZ97 194 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 MAP3K7O43318 606 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 CYP1A2P05177 515 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 H2AFZP0C0S5 128 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 UGT2B7P16662 529 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 IGFBP2P18065 325 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 KLK2P20151 261 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 PDHA2P29803 388 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms