RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 GLYATL1P3A0A0U1RQE8 302 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 A6NHS1 94 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 E9PAM4 449 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 F5H423 210 aaPredicted RBP3.52□□□□□ -1.85
USP53-205ENST00000509769 CYP27B1O15528 508 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 TBX1O43435 398 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 SMAD6O43541 496 aaKnown RBP3.52□□□□□ -1.85
USP53-205ENST00000509769 CREBL2O60519 120 aaPredicted RBP3.52□□□□□ -1.85
USP53-205ENST00000509769 DGAT1O75907 488 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 CYP17A1P05093 508 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 NOS3P29474 1203 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 ALDH4A1P30038 563 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 ALDH1B1P30837 517 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 FMO5P49326 533 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 GALCP54803 685 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 HADHBP55084 474 aaKnown RBP3.52□□□□□ -1.85
USP53-205ENST00000509769 PPP2R2BQ00005 443 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 ARHGAP1Q07960 439 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 TLR1Q15399 786 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 C3orf38Q5JPI3 329 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 CDKAL1Q5VV42 579 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 PRAMEF13Q5VWM6 474 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 RTL6Q6ICC9 239 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 DOK6Q6PKX4 331 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 UQCC3Q6UW78 93 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 DDX53Q86TM3 631 aaKnown RBP3.52□□□□□ -1.85
USP53-205ENST00000509769 PPP1R3BQ86XI6 285 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 ARHGAP12Q8IWW6 846 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 MCEMP1Q8IX19 187 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 GTPBP8Q8N3Z3 284 aaPredicted RBP3.52□□□□□ -1.85
USP53-205ENST00000509769 KLHL36Q8N4N3 616 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 LZTR1Q8N653 840 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 ZNF614Q8N883 585 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 SCGB1C1Q8TD33 95 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 PHF10Q8WUB8 498 aaKnown RBP3.52□□□□□ -1.85
USP53-205ENST00000509769 DCAKDQ8WVC6 231 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 FIG4Q92562 907 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 PRCCQ92733 491 aaPredicted RBP3.52□□□□□ -1.85
USP53-205ENST00000509769 FATE1Q969F0 183 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 ZUFSPQ96AP4 578 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 DCPSQ96C86 337 aaKnown RBP3.52□□□□□ -1.85
USP53-205ENST00000509769 CMBLQ96DG6 245 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 FAM89AQ96GI7 184 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 FAXDC2Q96IV6 333 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 CLIC6Q96NY7 704 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 TLR10Q9BXR5 811 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 COL25A1Q9BXS0 654 aaPredicted RBP3.52□□□□□ -1.85
USP53-205ENST00000509769 ACE2Q9BYF1 805 aaPredicted RBP3.52□□□□□ -1.85
USP53-205ENST00000509769 B3GNT5Q9BYG0 378 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 NXF2Q9GZY0 626 aaKnown RBP3.52□□□□□ -1.85
USP53-205ENST00000509769 PIGMQ9H3S5 423 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 DHX35Q9H5Z1 703 aaKnown RBP3.52□□□□□ -1.85
USP53-205ENST00000509769 TUBG2Q9NRH3 451 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 SEMA3GQ9NS98 782 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 TBC1D22BQ9NU19 505 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 NDFIP2Q9NV92 336 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 VNN3Q9NY84 501 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 TAS2R13Q9NYV9 303 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 CCDC167Q9P0B6 97 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 SAE1Q9UBE0 346 aaPredicted RBP3.52□□□□□ -1.85
USP53-205ENST00000509769 DAGLAQ9Y4D2 1042 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 USP31Q70CQ4 1352 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 LRRC14BA6NHZ5 514 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 ARGFXA6NJG6 315 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 A8MUA0 341 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 M0R143 59 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 SH2B2O14492 632 aaPredicted RBP3.52□□□□□ -1.85
USP53-205ENST00000509769 RAD1O60671 282 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 LILRB5O75023 590 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 BCAS2O75934 225 aaPredicted RBP3.52□□□□□ -1.85
USP53-205ENST00000509769 CDK14O94921 469 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 PAPSS2O95340 614 aaPredicted RBP3.52□□□□□ -1.85
USP53-205ENST00000509769 PDYNP01213 254 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 HRGP04196 525 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 CLEC3BP05452 202 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 PROS1P07225 676 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 ZBTB48P10074 688 aaPredicted RBP3.52□□□□□ -1.85
USP53-205ENST00000509769 RAP2AP10114 183 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 MYBP10242 640 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 CKMT1AP12532 417 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 RAB5AP20339 215 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 CYP2A7P20853 494 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 BGNP21810 368 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 CDC25CP30307 473 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 GUCY1A2P33402 732 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 RENBPP51606 427 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 RAP2BP61225 183 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 E2F1Q01094 437 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 GNMTQ14749 295 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 DUSP6Q16828 381 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 NADK2Q4G0N4 442 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 C14orf28Q4W4Y0 310 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 DCAF6Q58WW2 860 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 TFDP3Q5H9I0 405 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 OTUD3Q5T2D3 398 aaPredicted RBP3.52□□□□□ -1.85
USP53-205ENST00000509769 TSTD2Q5T7W7 516 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 SLFN13Q68D06 897 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 TANGO2Q6ICL3 276 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 KIAA1161Q6NSJ0 714 aa3.52□□□□□ -1.85
USP53-205ENST00000509769 WDR74Q6RFH5 385 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms