RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 HRH3Q9Y5N1 445 aa6.91□□□□□ -1.3
VCAN-207ENST00000507162 COLEC10Q9Y6Z7 277 aa6.91□□□□□ -1.3
VCAN-207ENST00000507162 PCM1Q15154 2024 aa6.91□□□□□ -1.3
VCAN-207ENST00000507162 MEGF8Q7Z7M0 2845 aa6.91□□□□□ -1.3
VCAN-207ENST00000507162 CUBNO60494 3623 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 TRIM64A6NGJ6 449 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 TRIM64BA6NI03 449 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 MATN2O00339 956 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 BTN3A1O00481 513 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 PHF1O43189 567 aaPredicted RBP6.9□□□□□ -1.3
VCAN-207ENST00000507162 CCP110O43303 1012 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 KCNJ13O60928 360 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 ALBP02768 609 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 POLBP06746 335 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 ITGAMP11215 1152 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 EEF1DP29692 281 aaKnown RBP6.9□□□□□ -1.3
VCAN-207ENST00000507162 MMP13P45452 471 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 OR1D4P47884 311 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 EEF1A2Q05639 463 aaKnown RBP6.9□□□□□ -1.3
VCAN-207ENST00000507162 CUL4AQ13619 759 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 FILIP1LQ4L180 1135 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 RALGPS1Q5JS13 557 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 ZNF658Q5TYW1 1059 aaPredicted RBP6.9□□□□□ -1.3
VCAN-207ENST00000507162 ISM2Q6H9L7 571 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 KLHL10Q6JEL2 608 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 WDR59Q6PJI9 974 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 CNSTQ6PJW8 725 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 TMEM220Q6QAJ8 160 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 NEK10Q6ZWH5 1172 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 FGD2Q7Z6J4 655 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 TRIM73Q86UV7 250 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 SIAH3Q8IW03 269 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 CHERPQ8IWX8 916 aaKnown RBP6.9□□□□□ -1.3
VCAN-207ENST00000507162 RAVER1Q8IY67 606 aaKnown RBP6.9□□□□□ -1.3
VCAN-207ENST00000507162 RPRMLQ8N4K4 120 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 TRAM1L1Q8N609 369 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 METTL27Q8N6F8 245 aaPredicted RBP6.9□□□□□ -1.3
VCAN-207ENST00000507162 NPWQ8N729 165 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 C19orf47Q8N9M1 422 aaKnown RBP6.9□□□□□ -1.3
VCAN-207ENST00000507162 SLC30A5Q8TAD4 765 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 FAM57AQ8TBR7 257 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 FKBP10Q96AY3 582 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 FERD3LQ96RJ6 166 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 C11orf70Q9BRQ4 267 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 ZSCAN5AQ9BUG6 496 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 MENTQ9BUN1 341 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 SELENOOQ9BVL4 669 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 NUP85Q9BW27 656 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 DHX35Q9H5Z1 703 aaKnown RBP6.9□□□□□ -1.3
VCAN-207ENST00000507162 WDR54Q9H977 334 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 BEX4Q9NWD9 120 aaPredicted RBP6.9□□□□□ -1.3
VCAN-207ENST00000507162 ANKRD10Q9NXR5 420 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 CTSFQ9UBX1 484 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 TTLL3Q9Y4R7 772 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 MAU2Q9Y6X3 613 aa6.9□□□□□ -1.3
VCAN-207ENST00000507162 A0A1B0GTH9 108 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 GTPBP10A4D1E9 387 aaKnown RBP6.89□□□□□ -1.31
VCAN-207ENST00000507162 C2orf74A8MZ97 194 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 H3BMH7 237 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 PSMA7O14818 248 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 CDC40O60508 579 aaKnown RBP eCLIP6.89□□□□□ -1.31
VCAN-207ENST00000507162 PEX11BO96011 259 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 MT-CYBP00156 380 aaPredicted RBP6.89□□□□□ -1.31
VCAN-207ENST00000507162 PRLP01236 227 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 MMEP08473 750 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 CD53P19397 219 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 FDXRP22570 491 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 CXCR2P25025 360 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 NDUFS1P28331 727 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 UQCRC1P31930 480 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 HTR7P34969 479 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 PTGER1P34995 402 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 CARSP49589 748 aaKnown RBP6.89□□□□□ -1.31
VCAN-207ENST00000507162 ARSEP51690 589 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 NUP107P57740 925 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 DSC2Q02487 901 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 KLC1Q07866 573 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 PNOCQ13519 176 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 STIM1Q13586 685 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 LAPTM4AQ15012 233 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 ZIC1Q15915 447 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 CA9Q16790 459 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 EXOC3L4Q17RC7 722 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 VWA3BQ502W6 1294 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 PPP6R3Q5H9R7 873 aaPredicted RBP6.89□□□□□ -1.31
VCAN-207ENST00000507162 METRNLQ641Q3 311 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 FCRLBQ6BAA4 426 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 SPINK14Q6IE38 97 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 GBP6Q6ZN66 633 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 RFX8Q6ZV50 586 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 COX15Q7KZN9 410 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 GALNTL5Q7Z4T8 443 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 TRIM59Q8IWR1 403 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 FAM71AQ8IYT1 594 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 C3orf20Q8ND61 904 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 DLG3Q92796 817 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.89□□□□□ -1.31
VCAN-207ENST00000507162 TMEM125Q96AQ2 219 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 MIEF2Q96C03 454 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 EID2BQ96D98 161 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms