RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 SLC4A1P02730 911 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 PROCP04070 461 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 THRAP10827 490 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 STMN1P16949 149 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 IMPA1P29218 277 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 AKT1P31749 480 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 PREPP48147 710 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 IRF9Q00978 393 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 CAMK2BQ13554 666 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 CCDC6Q16204 474 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 TSNAXIP1Q2TAA8 658 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 TTLL9Q3SXZ7 439 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 ZNF425Q6IV72 752 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 CCDC25Q86WR0 208 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 CPNE9Q8IYJ1 553 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 CFAP206Q8IYR0 622 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 PPM1NQ8N819 430 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 OR4D9Q8NGE8 314 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 ADAMTS14Q8WXS8 1223 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 RHBDF1Q96CC6 855 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 SEC16BQ96JE7 1060 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 OR2A14Q96R47 310 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 CD180Q99467 661 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 PARVBQ9HBI1 364 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 NCDNQ9UBB6 729 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 PPT2Q9UMR5 302 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 GPSM3Q9Y4H4 160 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 GOLGA8CPA6NN73 597 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 MATN2O00339 956 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 CFIP05156 583 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 ANXA6P08133 673 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 ALPPL2P10696 532 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 PMLP29590 882 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 HNMTP50135 292 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 TRA2AQ13595 282 aaKnown RBP eCLIP8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 GPR18Q14330 331 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 TMED2Q15363 201 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 PTRHD1Q6GMV3 140 aaKnown RBP8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 DOK6Q6PKX4 331 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 KMT5CQ86Y97 462 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 LMNTD1Q8N9Z9 388 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 STON2Q8WXE9 905 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 SLC41A2Q96JW4 573 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 ZNF768Q9H5H4 540 aaKnown RBP8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 NT5DC2Q9H857 520 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 CAB39LQ9H9S4 337 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 KCNE1BA0A087WTH5 132 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 IQANK1A0A1B0GTG1 560 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 C4orf47A7E2U8 309 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 PIAS1O75925 651 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 LTA4HP09960 611 aaKnown RBP8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 IL2P60568 153 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 SHC2P98077 582 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 INSM1Q01101 510 aaPredicted RBP8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 CDHR3Q6ZTQ4 885 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 RNF44Q7L0R7 432 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 SLCO6A1Q86UG4 719 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 SPNS2Q8IVW8 549 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 ABHD11Q8NFV4 315 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 ZNF483Q8TF39 744 aaPredicted RBP8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 SH3KBP1Q96B97 665 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 LIN37Q96GY3 246 aaPredicted RBP8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 PKP4Q99569 1192 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 EHD1Q9H4M9 534 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 EVA1BQ9NVM1 165 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 GPRC5BQ9NZH0 403 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 NUDT4Q9NZJ9 180 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 ENTPD2Q9Y5L3 495 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 FITM1A5D6W6 292 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 OR5K3A6NET4 321 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 RPS17P08708 135 aaKnown RBP8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 MSH2P43246 934 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 ZNF460Q14592 562 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 SETDB1Q15047 1291 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 ZNF542PQ5EBM4 170 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 LCTLQ6UWM7 567 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 EXOC3L1Q86VI1 746 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 TCAIMQ8N3R3 496 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 OR52E1Q8NGJ3 308 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 OR5AR1Q8NGP9 310 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 NAT14Q8WUY8 206 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 CCDC138Q96M89 665 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 NMRAL1Q9HBL8 299 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 DKK4Q9UBT3 224 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 TRMT6Q9UJA5 497 aaKnown RBP8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 A0A1W2PNU3 283 aaPredicted RBP8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 A0A1W2PPM1 405 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 ERLIN1O75477 346 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 ACTR1BP42025 376 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 EMP3P54852 163 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 ACTR1AP61163 376 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 NAA20P61599 178 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 GALNT1Q10472 559 aaPredicted RBP8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 TBCCQ15814 346 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 PHKG1Q16816 387 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 DEFB133Q30KQ1 61 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 CCSMST1Q4G0I0 132 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 GUSBP11Q6P575 273 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 TAOK1Q7L7X3 1001 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms