RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 GRPEL1Q9HAV7 217 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 PIH1D3Q9NQM4 214 aaKnown RBP2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 PRMT7Q9NVM4 692 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 PTTG2Q9NZH5 202 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 IL17BQ9UHF5 180 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 SLC24A2Q9UI40 661 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 CCL27Q9Y4X3 112 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 ZFP37Q9Y6Q3 630 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 IGLV5-45A0A087WSX0 123 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 A0A1W2PPM1 405 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 PI4K2BG5E9Z4 385 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 H0Y626 953 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 C16orf97H3BN30 126 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 CAPN9O14815 690 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 PSMA7O14818 248 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 BUB3O43684 328 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 SYNGR3O43761 229 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 CTSVO60911 334 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 CELF2O95319 508 aaKnown RBP2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 BAG4O95429 457 aaKnown RBP2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 FYNP06241 537 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 CCDC175P0C221 793 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 OR2T7P0C7T2 308 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 CETPP11597 493 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 STMN1P16949 149 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 ERCC2P18074 760 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 PCGF2P35227 344 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 SLC9A3P48764 834 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 RAB28P51157 221 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 DVL1P1P54792 670 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 TPD52P55327 224 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 HNRNPKP61978 463 aaKnown RBP eCLIP2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 PITX1P78337 314 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 RBP5P82980 135 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 UBXN1Q04323 297 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 MBTD1Q05BQ5 628 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 PNRC1Q12796 327 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 BFSP1Q12934 665 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 PPP2R5CQ13362 524 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 KLHL26Q53HC5 615 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 MDH1BQ5I0G3 518 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 KRBOX4Q5JUW0 171 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 GRTP1Q5TC63 336 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 KRT39Q6A163 491 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 ZNF449Q6P9G9 518 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 C11orf88Q6PI97 169 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 FAM198BQ6UWH4 519 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 RBPMS2Q6ZRY4 209 aaKnown RBP2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 MFSD6Q6ZSS7 791 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 FOXL2NBQ6ZUU3 175 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 TMPRSS11FQ6ZWK6 438 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 CHST3Q7LGC8 479 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 CCDC91Q7Z6B0 441 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 CENPVQ7Z7K6 275 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 SLFN11Q7Z7L1 901 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 LCA5Q86VQ0 697 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 OR8H3Q8N146 312 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 CCAR2Q8N163 923 aaKnown RBP2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 CRYBG2Q8N1P7 616 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 METTL27Q8N6F8 245 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 ARL6IP6Q8N6S5 226 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 TEX9Q8N6V9 391 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 PI4KAP1Q8N8J0 262 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 XXYLT1Q8NBI6 393 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 SLC4A11Q8NBS3 891 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 Q8NFD4 153 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 DMBX1Q8NFW5 382 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 OR8H1Q8NGG4 311 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 SLAMF9Q96A28 289 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 HDAC11Q96DB2 347 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 TBC1D31Q96DN5 1066 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 CFAP57Q96MR6 1250 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 SFXN2Q96NB2 322 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 SPAG5Q96R06 1193 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 MYCBPQ99417 103 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 PKP4Q99569 1192 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 NAA11Q9BSU3 229 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 LMF2Q9BU23 707 aaKnown RBP2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 NUP85Q9BW27 656 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 XPO4Q9C0E2 1151 aaKnown RBP2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 WNT5BQ9H1J7 359 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 C2orf40Q9H1Z8 148 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 ST6GALNAC4Q9H4F1 302 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 APOBEC3GQ9HC16 384 aaKnown RBP2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 XAB2Q9HCS7 855 aaKnown RBP2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 ACKR4Q9NPB9 350 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 SLC38A7Q9NVC3 462 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 DPP3Q9NY33 737 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 STK26Q9P289 416 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 EPS15L1Q9UBC2 864 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 ODF2LQ9ULJ1 636 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 TMCC3Q9ULS5 477 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 FAF1Q9UNN5 650 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 GRIP1Q9Y3R0 1128 aa2.29□□□□□ -2.04
HMGB1P35-201ENST00000503360 GPRASP1Q5JY77 1395 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 FLT1P17948 1338 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 A0A1W2PPI3 338 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 FEZF1A0PJY2 475 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 HYKKA2RU49 373 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 PRR23AA6NEV1 266 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms