RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	C6orf136	Q5SQH8	315 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	GPRIN3	Q6ZVF9	776 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	CEP68	Q76N32	757 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	VTCN1	Q7Z7D3	282 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	SYVN1	Q86TM6	617 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	GLCCI1	Q86VQ1	547 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	C12orf42	Q96LP6	360 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	OR52E6	Q96RD3	313 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	TNFSF13B	Q9Y275	285 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	NIN	Q8N4C6	2090 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597		A0A1W2PQ09	198 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	UPK3BL1	B0FP48	263 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	UPK3BL2	E5RIL1	263 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	RGS13	O14921	159 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	AREL1	O15033	823 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	DCLK1	O15075	740 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	PCMT1	P22061	227 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	MYL9	P24844	172 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	GABARAPL2	P60520	117 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	DSC2	Q02487	901 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	C18orf21	Q32NC0	220 aa	Predicted RBP	10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	UAP1L1	Q3KQV9	507 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	BRMS1L	Q5PSV4	323 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	TWF2	Q6IBS0	349 aa	Known RBP	10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	RIOX2	Q8IUF8	465 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	FBXO16	Q8IX29	292 aa	Predicted RBP	10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	KRTCAP2	Q8N6L1	136 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	C2CD4A	Q8NCU7	369 aa	Predicted RBP	10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	OR13C4	Q8NGS5	318 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	DIRAS2	Q96HU8	199 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	IL1RAP	Q9NPH3	570 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	FBXL12	Q9NXK8	326 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	CRNN	Q9UBG3	495 aa	Predicted RBP	10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	FBXO10	Q9UK96	956 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	KCNH4	Q9UQ05	1017 aa		10.42	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	PRRC2B	Q5JSZ5	2229 aa	Known RBP	10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	TRIM64	A6NGJ6	449 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	LZTS3	O60299	673 aa	Predicted RBP	10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	HMBS	P08397	361 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	EMX2	Q04743	252 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	LAIR2	Q6ISS4	152 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	GADL1	Q6ZQY3	521 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	POF1B	Q8WVV4	589 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	RASSF5	Q8WWW0	418 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	FAM167A	Q96KS9	214 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	IKZF5	Q9H5V7	419 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	ASB7	Q9H672	318 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	TRIM45	Q9H8W5	580 aa	Predicted RBP	10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	REEP1	Q9H902	201 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	SP110	Q9HB58	689 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	AIG1	Q9NVV5	245 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	UBA2	Q9UBT2	640 aa	Predicted RBP	10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	LYVE1	Q9Y5Y7	322 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	ADAMTSL1	Q8N6G6	1762 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	PER2	O15055	1255 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	SCO2	O43819	266 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	CREG1	O75629	220 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	B3GALT4	O96024	378 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	INSRR	P14616	1297 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	AKR1D1	P51857	326 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	RPP38	P78345	283 aa	Known RBP	10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	ZNF45	Q02386	682 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	CHRNE	Q04844	493 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	CDC20	Q12834	499 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	RCAN2	Q14206	197 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	STK11	Q15831	433 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	TAF12	Q16514	161 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	ZNF284	Q2VY69	593 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	FBXO47	Q5MNV8	452 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	FAM205BP	Q63HN1	556 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	LAIR1	Q6GTX8	287 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	ZNF605	Q86T29	641 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	NLRP8	Q86W28	1048 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	ZDHHC17	Q8IUH5	632 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	CYP4Z2P	Q8N1L4	340 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	YIPF7	Q8N8F6	280 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	NETO1	Q8TDF5	533 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	GPR151	Q8TDV0	419 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	CDADC1	Q9BWV3	514 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	ELOVL6	Q9H5J4	265 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	ABCB8	Q9NUT2	735 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	FAM8A1	Q9UBU6	413 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	USP3	Q9Y6I4	520 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	FOCAD	Q5VW36	1801 aa		10.41	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	FAM234B	A2RU67	622 aa		10.4	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	NCAM2	O15394	837 aa		10.4	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	ECI2	O75521	394 aa		10.4	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	MYC	P01106	439 aa	Predicted RBP	10.4	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	CKMT1A	P12532	417 aa		10.4	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	TNFSF8	P32971	234 aa		10.4	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	CRISP3	P54108	245 aa		10.4	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	MBTD1	Q05BQ5	628 aa		10.4	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	GRM1	Q13255	1194 aa		10.4	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	PAFAH1B3	Q15102	231 aa	Known RBP	10.4	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	ZNF57	Q68EA5	555 aa	Predicted RBP	10.4	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	WDR36	Q8NI36	951 aa	Known RBP	10.4	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	DNASE1L2	Q92874	299 aa		10.4	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	COQ8B	Q96D53	544 aa		10.4	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	ST6GAL2	Q96JF0	529 aa		10.4	□□□□□ -0.74
TRAPPC12-223	ENST00000497597	TMEM209	Q96SK2	561 aa		10.4	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms