RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 GPR26Q8NDV2 337 aa13.89□□□□□ -0.19
CHMP2B-205ENST00000494980 NRTNQ99748 197 aa13.89□□□□□ -0.19
CHMP2B-205ENST00000494980 SRMSQ9H3Y6 488 aa13.89□□□□□ -0.19
CHMP2B-205ENST00000494980 TAS2R14Q9NYV8 317 aa13.89□□□□□ -0.19
CHMP2B-205ENST00000494980 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.89□□□□□ -0.19
CHMP2B-205ENST00000494980 DAPK3O43293 454 aa13.88□□□□□ -0.19
CHMP2B-205ENST00000494980 KCNJ13O60928 360 aa13.88□□□□□ -0.19
CHMP2B-205ENST00000494980 PIM1P11309 404 aaPredicted RBP13.88□□□□□ -0.19
CHMP2B-205ENST00000494980 CD44P16070 742 aaKnown RBP13.88□□□□□ -0.19
CHMP2B-205ENST00000494980 ERCC2P18074 760 aa13.88□□□□□ -0.19
CHMP2B-205ENST00000494980 GPD1P21695 349 aa13.88□□□□□ -0.19
CHMP2B-205ENST00000494980 CMA1P23946 247 aa13.88□□□□□ -0.19
CHMP2B-205ENST00000494980 EEF1DP29692 281 aaKnown RBP13.88□□□□□ -0.19
CHMP2B-205ENST00000494980 PBLDP30039 288 aaPredicted RBP13.88□□□□□ -0.19
CHMP2B-205ENST00000494980 PTGS2P35354 604 aa13.88□□□□□ -0.19
CHMP2B-205ENST00000494980 RAB28P51157 221 aa13.88□□□□□ -0.19
CHMP2B-205ENST00000494980 NUP107P57740 925 aa13.88□□□□□ -0.19
CHMP2B-205ENST00000494980 EEF1A2Q05639 463 aaKnown RBP13.88□□□□□ -0.19
CHMP2B-205ENST00000494980 PMPCAQ10713 525 aa13.88□□□□□ -0.19
CHMP2B-205ENST00000494980 IHHQ14623 411 aa13.88□□□□□ -0.19
CHMP2B-205ENST00000494980 COBLL1Q53SF7 1204 aa13.88□□□□□ -0.19
CHMP2B-205ENST00000494980 FOXD4L5Q5VV16 416 aaPredicted RBP13.88□□□□□ -0.19
CHMP2B-205ENST00000494980 PDPK2PQ6A1A2 396 aa13.88□□□□□ -0.19
CHMP2B-205ENST00000494980 TMTC1Q8IUR5 882 aa13.88□□□□□ -0.19
CHMP2B-205ENST00000494980 PRSS58Q8IYP2 241 aa13.88□□□□□ -0.19
CHMP2B-205ENST00000494980 LCN9Q8WX39 176 aa13.88□□□□□ -0.19
CHMP2B-205ENST00000494980 FOXD4L4Q8WXT5 416 aaPredicted RBP13.88□□□□□ -0.19
CHMP2B-205ENST00000494980 TDRD1Q9BXT4 1180 aaKnown RBP13.88□□□□□ -0.19
CHMP2B-205ENST00000494980 PLEKHF2Q9H8W4 249 aa13.88□□□□□ -0.19
CHMP2B-205ENST00000494980 NT5MQ9NPB1 228 aa13.88□□□□□ -0.19
CHMP2B-205ENST00000494980 GNPTGQ9UJJ9 305 aa13.88□□□□□ -0.19
CHMP2B-205ENST00000494980 MKL2Q9ULH7 1088 aa13.88□□□□□ -0.19
CHMP2B-205ENST00000494980 POP7O75817 140 aaKnown RBP13.87□□□□□ -0.19
CHMP2B-205ENST00000494980 PRLP01236 227 aa13.87□□□□□ -0.19
CHMP2B-205ENST00000494980 SLC4A1P02730 911 aa13.87□□□□□ -0.19
CHMP2B-205ENST00000494980 ZNF24P17028 368 aa13.87□□□□□ -0.19
CHMP2B-205ENST00000494980 CARSP49589 748 aaKnown RBP13.87□□□□□ -0.19
CHMP2B-205ENST00000494980 NDUFA8P51970 172 aa13.87□□□□□ -0.19
CHMP2B-205ENST00000494980 AIF1P55008 147 aa13.87□□□□□ -0.19
CHMP2B-205ENST00000494980 STX17P56962 302 aa13.87□□□□□ -0.19
CHMP2B-205ENST00000494980 DCDC1P59894 354 aa13.87□□□□□ -0.19
CHMP2B-205ENST00000494980 KLC1Q07866 573 aa13.87□□□□□ -0.19
CHMP2B-205ENST00000494980 KRTAP24-1Q3LI83 254 aa13.87□□□□□ -0.19
CHMP2B-205ENST00000494980 FLYWCH1Q4VC44 716 aa13.87□□□□□ -0.19
CHMP2B-205ENST00000494980 ZNF658Q5TYW1 1059 aaPredicted RBP13.87□□□□□ -0.19
CHMP2B-205ENST00000494980 TXNRD3NBQ6F5E7 133 aa13.87□□□□□ -0.19
CHMP2B-205ENST00000494980 TIGD7Q6NT04 549 aaPredicted RBP13.87□□□□□ -0.19
CHMP2B-205ENST00000494980 RIPOR1Q6ZS17 1223 aa13.87□□□□□ -0.19
CHMP2B-205ENST00000494980 RFX8Q6ZV50 586 aa13.87□□□□□ -0.19
CHMP2B-205ENST00000494980 FAM71AQ8IYT1 594 aa13.87□□□□□ -0.19
CHMP2B-205ENST00000494980 AMER2Q8N7J2 671 aa13.87□□□□□ -0.19
CHMP2B-205ENST00000494980 DLG3Q92796 817 aa13.87□□□□□ -0.19
CHMP2B-205ENST00000494980 EID2BQ96D98 161 aa13.87□□□□□ -0.19
CHMP2B-205ENST00000494980 SIGLEC12Q96PQ1 595 aa13.87□□□□□ -0.19
CHMP2B-205ENST00000494980 TMPRSS11EQ9UL52 423 aa13.87□□□□□ -0.19
CHMP2B-205ENST00000494980 TENM1Q9UKZ4 2725 aa13.86□□□□□ -0.19
CHMP2B-205ENST00000494980 VSTM2BA6NLU5 285 aa13.86□□□□□ -0.19
CHMP2B-205ENST00000494980 SPRY1O43609 319 aaPredicted RBP13.86□□□□□ -0.19
CHMP2B-205ENST00000494980 ONECUT2O95948 504 aa13.86□□□□□ -0.19
CHMP2B-205ENST00000494980 MT-CYBP00156 380 aaPredicted RBP13.86□□□□□ -0.19
CHMP2B-205ENST00000494980 BMP7P18075 431 aa13.86□□□□□ -0.19
CHMP2B-205ENST00000494980 GCGRP47871 477 aa13.86□□□□□ -0.19
CHMP2B-205ENST00000494980 BPIFB4P59827 614 aa13.86□□□□□ -0.19
CHMP2B-205ENST00000494980 ITKQ08881 620 aa13.86□□□□□ -0.19
CHMP2B-205ENST00000494980 TMEM115Q12893 351 aaPredicted RBP13.86□□□□□ -0.19
CHMP2B-205ENST00000494980 KRT33BQ14525 404 aa13.86□□□□□ -0.19
CHMP2B-205ENST00000494980 CA9Q16790 459 aa13.86□□□□□ -0.19
CHMP2B-205ENST00000494980 RNFT1Q5M7Z0 435 aa13.86□□□□□ -0.19
CHMP2B-205ENST00000494980 MARC1Q5VT66 337 aa13.86□□□□□ -0.19
CHMP2B-205ENST00000494980 NLRP9Q7RTR0 991 aa13.86□□□□□ -0.19
CHMP2B-205ENST00000494980 HOOK3Q86VS8 718 aa13.86□□□□□ -0.19
CHMP2B-205ENST00000494980 METTL27Q8N6F8 245 aaPredicted RBP13.86□□□□□ -0.19
CHMP2B-205ENST00000494980 MDS2Q8NDY4 140 aa13.86□□□□□ -0.19
CHMP2B-205ENST00000494980 GDAP1Q8TB36 358 aa13.86□□□□□ -0.19
CHMP2B-205ENST00000494980 CCDC34Q96HJ3 373 aa13.86□□□□□ -0.19
CHMP2B-205ENST00000494980 C11orf70Q9BRQ4 267 aa13.86□□□□□ -0.19
CHMP2B-205ENST00000494980 TP63Q9H3D4 680 aaPredicted RBP13.86□□□□□ -0.19
CHMP2B-205ENST00000494980 DHX35Q9H5Z1 703 aaKnown RBP13.86□□□□□ -0.19
CHMP2B-205ENST00000494980 C3orf18Q9UK00 162 aa13.86□□□□□ -0.19
CHMP2B-205ENST00000494980 AP4E1Q9UPM8 1137 aa13.86□□□□□ -0.19
CHMP2B-205ENST00000494980 A0A1B0GTH9 108 aa13.85□□□□□ -0.19
CHMP2B-205ENST00000494980 GTPBP10A4D1E9 387 aaKnown RBP13.85□□□□□ -0.19
CHMP2B-205ENST00000494980 C2orf74A8MZ97 194 aa13.85□□□□□ -0.19
CHMP2B-205ENST00000494980 KRT3P12035 628 aa13.85□□□□□ -0.19
CHMP2B-205ENST00000494980 NDUFS1P28331 727 aa13.85□□□□□ -0.19
CHMP2B-205ENST00000494980 ST13P50502 369 aaKnown RBP13.85□□□□□ -0.19
CHMP2B-205ENST00000494980 METRNLQ641Q3 311 aa13.85□□□□□ -0.19
CHMP2B-205ENST00000494980 WDR59Q6PJI9 974 aa13.85□□□□□ -0.19
CHMP2B-205ENST00000494980 SPESP1Q6UW49 350 aa13.85□□□□□ -0.19
CHMP2B-205ENST00000494980 CAPN12Q6ZSI9 719 aa13.85□□□□□ -0.19
CHMP2B-205ENST00000494980 ACAD11Q709F0 780 aa13.85□□□□□ -0.19
CHMP2B-205ENST00000494980 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.85□□□□□ -0.19
CHMP2B-205ENST00000494980 YTHDF3Q7Z739 585 aaKnown RBP13.85□□□□□ -0.19
CHMP2B-205ENST00000494980 PAQR7Q86WK9 346 aa13.85□□□□□ -0.19
CHMP2B-205ENST00000494980 MCATQ8IVS2 390 aaKnown RBP13.85□□□□□ -0.19
CHMP2B-205ENST00000494980 ACVR1CQ8NER5 493 aa13.85□□□□□ -0.19
CHMP2B-205ENST00000494980 NSMCE1Q8WV22 266 aa13.85□□□□□ -0.19
CHMP2B-205ENST00000494980 ZNF592Q92610 1267 aa13.85□□□□□ -0.19
CHMP2B-205ENST00000494980 ZNF653Q96CK0 615 aa13.85□□□□□ -0.19
CHMP2B-205ENST00000494980 SCMH1Q96GD3 660 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms