RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 ZNF786Q8N393 782 aa12.58□□□□□ -0.4
PRAME-213ENST00000492657 LIX1Q8N485 282 aa12.58□□□□□ -0.4
PRAME-213ENST00000492657 DPP10Q8N608 796 aa12.58□□□□□ -0.4
PRAME-213ENST00000492657 KREMEN2Q8NCW0 462 aa12.58□□□□□ -0.4
PRAME-213ENST00000492657 SORCS1Q8WY21 1168 aa12.58□□□□□ -0.4
PRAME-213ENST00000492657 PYCR2Q96C36 320 aa12.58□□□□□ -0.4
PRAME-213ENST00000492657 COPS8Q99627 209 aa12.58□□□□□ -0.4
PRAME-213ENST00000492657 BEGAINQ9BUH8 593 aa12.58□□□□□ -0.4
PRAME-213ENST00000492657 IKZF5Q9H5V7 419 aa12.58□□□□□ -0.4
PRAME-213ENST00000492657 BRD9Q9H8M2 597 aa12.58□□□□□ -0.4
PRAME-213ENST00000492657 FAM8A1Q9UBU6 413 aa12.58□□□□□ -0.4
PRAME-213ENST00000492657 PDE10AQ9Y233 779 aa12.58□□□□□ -0.4
PRAME-213ENST00000492657 SH3GLB1Q9Y371 365 aa12.58□□□□□ -0.4
PRAME-213ENST00000492657 MANBAO00462 879 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 ULK1O75385 1050 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 SEC22BO75396 215 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 ENO2P09104 434 aaPredicted RBP12.57□□□□□ -0.4
PRAME-213ENST00000492657 C1SP09871 688 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 MAPK8P45983 427 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 CRY1Q16526 586 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 FAM174BQ3ZCQ3 159 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 ZNF648Q5T619 568 aaPredicted RBP12.57□□□□□ -0.4
PRAME-213ENST00000492657 IRAK1BP1Q5VVH5 260 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 BORAQ6PGQ7 559 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 DTWD1Q8N5C7 304 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 SCAMP4Q969E2 229 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 PPP3R2Q96LZ3 170 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 RNF145Q96MT1 663 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 MTG2Q9H4K7 406 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 CLK4Q9HAZ1 481 aaKnown RBP12.57□□□□□ -0.4
PRAME-213ENST00000492657 ARL15Q9NXU5 204 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 ZDHHC3Q9NYG2 299 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 TRIM43BA6NCK2 446 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 AGAP14A8MT82 685 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 J3QRK9 145 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 EI24O14681 340 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 STK16O75716 305 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 B3GALT4O96024 378 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 GPIP06744 558 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 CLTBP09497 229 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 CTSAP10619 480 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 PCNAP12004 261 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 EPB42P16452 691 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 CD247P20963 164 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 HTR1EP28566 365 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 RFC2P35250 354 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 NSG1P42857 185 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 RPIAP49247 311 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 GTDC1Q4AE62 458 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 SPANXN4Q5MJ08 99 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 LYPLAL1Q5VWZ2 237 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 TBPL2Q6SJ96 375 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 ZBTB8BQ8NAP8 495 aaPredicted RBP12.57□□□□□ -0.4
PRAME-213ENST00000492657 TRIM43Q96BQ3 446 aaPredicted RBP12.57□□□□□ -0.4
PRAME-213ENST00000492657 ULK4Q96C45 1275 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 FBXL8Q96CD0 374 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 ECHDC3Q96DC8 303 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 LYSMD1Q96S90 227 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 CHID1Q9BWS9 393 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 ANKRD60Q9BZ19 345 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 KCTD5Q9NXV2 234 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 SELENONQ9NZV5 590 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 ZNF106Q9H2Y7 1883 aaKnown RBP12.57□□□□□ -0.4
PRAME-213ENST00000492657 CHD9Q3L8U1 2897 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 TTC36A6NLP5 189 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 RGS14O43566 566 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 RFPL2O75678 378 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 ATP6AP1Q15904 470 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 CARD16Q5EG05 197 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 TTC33Q6PID6 262 aaPredicted RBP12.57□□□□□ -0.4
PRAME-213ENST00000492657 SLC22A15Q8IZD6 547 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 NAT16Q8N8M0 369 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 SMYD1Q8NB12 490 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 FBXL20Q96IG2 436 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 NAA50Q9GZZ1 169 aaKnown RBP12.57□□□□□ -0.4
PRAME-213ENST00000492657 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.57□□□□□ -0.42e-30■□□□□ 9.2
PRAME-213ENST00000492657 HS3ST2Q9Y278 367 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 HCFC2Q9Y5Z7 792 aa12.57□□□□□ -0.4
PRAME-213ENST00000492657 HIDE1A8MVS5 230 aa12.56□□□□□ -0.4
PRAME-213ENST00000492657 ARNTLO00327 626 aa12.56□□□□□ -0.4
PRAME-213ENST00000492657 PWP1Q13610 501 aa12.56□□□□□ -0.4
PRAME-213ENST00000492657 BOP1Q14137 746 aaKnown RBP12.56□□□□□ -0.4
PRAME-213ENST00000492657 IMPG1Q17R60 797 aa12.56□□□□□ -0.4
PRAME-213ENST00000492657 LRRC26Q2I0M4 334 aa12.56□□□□□ -0.4
PRAME-213ENST00000492657 POM121L1PQ3SYA9 428 aa12.56□□□□□ -0.4
PRAME-213ENST00000492657 INTS11Q5TA45 600 aaKnown RBP12.56□□□□□ -0.4
PRAME-213ENST00000492657 USP45Q70EL2 814 aa12.56□□□□□ -0.4
PRAME-213ENST00000492657 UBE2R2Q712K3 238 aaPredicted RBP12.56□□□□□ -0.4
PRAME-213ENST00000492657 PATL1Q86TB9 770 aaKnown RBP12.56□□□□□ -0.4
PRAME-213ENST00000492657 RNF175Q8N4F7 328 aa12.56□□□□□ -0.4
PRAME-213ENST00000492657 FAM86B1Q8N7N1 296 aa12.56□□□□□ -0.4
PRAME-213ENST00000492657 BEND7Q8N7W2 519 aaPredicted RBP12.56□□□□□ -0.4
PRAME-213ENST00000492657 CYGBQ8WWM9 190 aa12.56□□□□□ -0.4
PRAME-213ENST00000492657 GTF2H4Q92759 462 aa12.56□□□□□ -0.4
PRAME-213ENST00000492657 VPS50Q96JG6 964 aa12.56□□□□□ -0.4
PRAME-213ENST00000492657 ZNF583Q96ND8 569 aa12.56□□□□□ -0.4
PRAME-213ENST00000492657 ADI1Q9BV57 179 aa12.56□□□□□ -0.4
PRAME-213ENST00000492657 PAIP1Q9H074 479 aaKnown RBP12.56□□□□□ -0.4
PRAME-213ENST00000492657 CARS2Q9HA77 564 aaKnown RBP12.56□□□□□ -0.4
PRAME-213ENST00000492657 LRTM1Q9HBL6 345 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms