RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 PHKG1Q16816 387 aa9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 CNPY1Q3B7I2 92 aa9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 TMEM259Q4ZIN3 620 aa9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 RABL3Q5HYI8 236 aa9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 KRT80Q6KB66 452 aa9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 PPP4R4Q6NUP7 873 aa9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 SLC2A7Q6PXP3 512 aa9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 ZBTB49Q6ZSB9 765 aa9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 CARM1Q86X55 608 aa9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 HID1Q8IV36 788 aa9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 TBC1D21Q8IYX1 336 aa9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 AADATQ8N5Z0 425 aa9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 MFSD2AQ8NA29 543 aa9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 GLB1L3Q8NCI6 653 aaPredicted RBP9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 TRPV3Q8NET8 790 aa9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 TNIP2Q8NFZ5 429 aa9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 OR8J3Q8NGG0 315 aa9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 DNAJB14Q8TBM8 379 aa9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 PROKR1Q8TCW9 393 aa9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 DIS3LQ8TF46 1054 aaKnown RBP9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 CENPNQ96H22 339 aaPredicted RBP9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 TEX37Q96LM6 180 aa9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 MAGEB10Q96LZ2 347 aaPredicted RBP9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 NSMCE2Q96MF7 247 aa9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 CIB1Q99828 191 aa9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 HAUS8Q9BT25 410 aa9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 DPY30Q9C005 99 aa9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 LRTM1Q9HBL6 345 aa9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 AGPAT4Q9NRZ5 378 aa9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 RAD18Q9NS91 495 aa9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 PNPLA3Q9NST1 481 aa9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 KLQ9UEF7 1012 aa9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 ZMYM5Q9UJ78 669 aa9.36□□□□□ -0.91
RAB3GAP1-205ENST00000489858 TCRBV5S2A0A599 114 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 C7orf72A4D263 438 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 A8MX80 341 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 WASH3PC4AMC7 463 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 MEN1O00255 615 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 FFAR3O14843 346 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 KIAA0355O15063 1070 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 KPNA5O15131 536 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 SLC16A5O15375 505 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 GPR42O15529 346 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 NUAK1O60285 661 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 PLXNA2O75051 1894 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 ULK1O75385 1050 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 GMNNO75496 209 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 STK16O75716 305 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 PGM3O95394 542 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 CLDN9O95484 217 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 CLPTM1O96005 669 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 LDLRP01130 860 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 ANXA6P08133 673 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 CDH1P12830 882 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 CSF2RAP15509 400 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 ZNF30P17039 623 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 GJA1P17302 382 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 CYP2A7P20853 494 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 LHCGRP22888 699 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 MAPK1P28482 360 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 HLA-FP30511 346 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 GNPDA1P46926 289 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 SPINT3P49223 89 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 POLE2P56282 527 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 POLR2LP62875 67 aaKnown RBP9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 PRKCQQ04759 706 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 ARHGEF7Q14155 803 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 ATP6AP1Q15904 470 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 FXNQ16595 210 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 CYP51A1Q16850 503 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 GGTA1PQ4G0N0 100 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 ATP13A5Q4VNC0 1218 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 HABP4Q5JVS0 413 aaKnown RBP9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 PLEKHS1Q5SXH7 462 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 TMTC4Q5T4D3 741 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 NANOGP8Q6NSW7 305 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 ELMSAN1Q6PJG2 1045 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 GDPD4Q6W3E5 623 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 UBE2R2Q712K3 238 aaPredicted RBP9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 RTL10Q7L3V2 364 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 IFNEQ86WN2 208 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 KIAA2013Q8IYS2 634 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 GALNT15Q8N3T1 639 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 PAPD5Q8NDF8 572 aaKnown RBP9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 NAT14Q8WUY8 206 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 ZFAND2BQ8WV99 257 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 SLC13A3Q8WWT9 602 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 RPL10LQ96L21 214 aaKnown RBP9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 CGREF1Q99674 301 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 NTMT1Q9BV86 223 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 SLC46A2Q9BY10 475 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 SMG9Q9H0W8 520 aaKnown RBP9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 C11orf49Q9H6J7 331 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 NANOGQ9H9S0 305 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 VCX3AQ9NNX9 186 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 INTS7Q9NVH2 962 aaKnown RBP9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 SMOXQ9NWM0 555 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 ARL15Q9NXU5 204 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 THEGQ9P2T0 379 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 B4GALT6Q9UBX8 382 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms