RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 HM13Q8TCT9 377 aa16.68■□□□□ 0.26
HMGN1-212ENST00000479586 ZNF398Q8TD17 642 aa16.68■□□□□ 0.26
HMGN1-212ENST00000479586 BLOC1S5Q8TDH9 187 aa16.68■□□□□ 0.26
HMGN1-212ENST00000479586 CPLX3Q8WVH0 158 aa16.68■□□□□ 0.26
HMGN1-212ENST00000479586 RAPGEF5Q92565 580 aa16.68■□□□□ 0.26
HMGN1-212ENST00000479586 RNF157Q96PX1 679 aa16.68■□□□□ 0.26
HMGN1-212ENST00000479586 SPSB2Q99619 263 aa16.68■□□□□ 0.26
HMGN1-212ENST00000479586 MESP1Q9BRJ9 268 aa16.68■□□□□ 0.26
HMGN1-212ENST00000479586 NDC1Q9BTX1 674 aa16.68■□□□□ 0.26
HMGN1-212ENST00000479586 HSD3B7Q9H2F3 369 aa16.68■□□□□ 0.26
HMGN1-212ENST00000479586 PKP3Q9Y446 797 aa16.68■□□□□ 0.26
HMGN1-212ENST00000479586 NCOA6Q14686 2063 aaPredicted RBP16.68■□□□□ 0.26
HMGN1-212ENST00000479586 SNRNP200O75643 2136 aaKnown RBP16.67■□□□□ 0.26
HMGN1-212ENST00000479586 A0A0A6YYK5 440 aaPredicted RBP16.67■□□□□ 0.26
HMGN1-212ENST00000479586 LOC285095A0A1B0GVY8 99 aa16.67■□□□□ 0.26
HMGN1-212ENST00000479586 CYP1A2P05177 515 aa16.67■□□□□ 0.26
HMGN1-212ENST00000479586 MST1P26927 711 aa16.67■□□□□ 0.26
HMGN1-212ENST00000479586 KIR3DL1P43629 444 aa16.67■□□□□ 0.26
HMGN1-212ENST00000479586 WNT3AP56704 352 aa16.67■□□□□ 0.26
HMGN1-212ENST00000479586 ARG2P78540 354 aa16.67■□□□□ 0.26
HMGN1-212ENST00000479586 MYL5Q02045 173 aa16.67■□□□□ 0.26
HMGN1-212ENST00000479586 NKG7Q16617 165 aa16.67■□□□□ 0.26
HMGN1-212ENST00000479586 TLDC1Q6P9B6 456 aa16.67■□□□□ 0.26
HMGN1-212ENST00000479586 XKRXQ6PP77 449 aa16.67■□□□□ 0.26
HMGN1-212ENST00000479586 KDELC1Q6UW63 502 aa16.67■□□□□ 0.26
HMGN1-212ENST00000479586 NPNTQ6UXI9 565 aa16.67■□□□□ 0.26
HMGN1-212ENST00000479586 COX15Q7KZN9 410 aa16.67■□□□□ 0.26
HMGN1-212ENST00000479586 OVCH1Q7RTY7 1134 aa16.67■□□□□ 0.26
HMGN1-212ENST00000479586 OR11G2Q8NGC1 345 aa16.67■□□□□ 0.26
HMGN1-212ENST00000479586 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.67■□□□□ 0.26
HMGN1-212ENST00000479586 FKBP10Q96AY3 582 aa16.67■□□□□ 0.26
HMGN1-212ENST00000479586 OR2A14Q96R47 310 aa16.67■□□□□ 0.26
HMGN1-212ENST00000479586 LMF1Q96S06 567 aa16.67■□□□□ 0.26
HMGN1-212ENST00000479586 OR52A5Q9H2C5 316 aa16.67■□□□□ 0.26
HMGN1-212ENST00000479586 SOX17Q9H6I2 414 aaPredicted RBP16.67■□□□□ 0.26
HMGN1-212ENST00000479586 PLA2G3Q9NZ20 509 aa16.67■□□□□ 0.26
HMGN1-212ENST00000479586 ICKQ9UPZ9 632 aa16.67■□□□□ 0.26
HMGN1-212ENST00000479586 MAP1AP78559 2803 aaPredicted RBP16.66■□□□□ 0.26
HMGN1-212ENST00000479586 HOXB4P17483 251 aaPredicted RBP16.66■□□□□ 0.26
HMGN1-212ENST00000479586 ALAS2P22557 587 aa16.66■□□□□ 0.26
HMGN1-212ENST00000479586 PRLHRP49683 370 aa16.66■□□□□ 0.26
HMGN1-212ENST00000479586 INAQ16352 499 aa16.66■□□□□ 0.26
HMGN1-212ENST00000479586 RBBP7Q16576 425 aa16.66■□□□□ 0.26
HMGN1-212ENST00000479586 FAM20CQ8IXL6 584 aa16.66■□□□□ 0.26
HMGN1-212ENST00000479586 DNAJC22Q8N4W6 341 aa16.66■□□□□ 0.26
HMGN1-212ENST00000479586 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.66■□□□□ 0.26
HMGN1-212ENST00000479586 C14orf79Q96F83 325 aa16.66■□□□□ 0.26
HMGN1-212ENST00000479586 OLFM3Q96PB7 478 aa16.66■□□□□ 0.26
HMGN1-212ENST00000479586 CHRNA10Q9GZZ6 450 aa16.66■□□□□ 0.26
HMGN1-212ENST00000479586 MVB12BQ9H7P6 319 aa16.66■□□□□ 0.26
HMGN1-212ENST00000479586 WDR54Q9H977 334 aa16.66■□□□□ 0.26
HMGN1-212ENST00000479586 COG4Q9H9E3 785 aa16.66■□□□□ 0.26
HMGN1-212ENST00000479586 MRM3Q9HC36 420 aaKnown RBP16.66■□□□□ 0.26
HMGN1-212ENST00000479586 SPHK1Q9NYA1 384 aa16.66■□□□□ 0.26
HMGN1-212ENST00000479586 HACD3Q9P035 362 aa16.66■□□□□ 0.26
HMGN1-212ENST00000479586 FAM153AQ9UHL3 310 aa16.66■□□□□ 0.26
HMGN1-212ENST00000479586 ZNF469Q96JG9 3925 aaPredicted RBP16.65■□□□□ 0.26
HMGN1-212ENST00000479586 IFRD1O00458 451 aaPredicted RBP16.65■□□□□ 0.26
HMGN1-212ENST00000479586 KDELR1P24390 212 aa16.65■□□□□ 0.26
HMGN1-212ENST00000479586 PTPN3P26045 913 aa16.65■□□□□ 0.26
HMGN1-212ENST00000479586 PDHA2P29803 388 aa16.65■□□□□ 0.26
HMGN1-212ENST00000479586 CD68P34810 354 aaPredicted RBP16.65■□□□□ 0.26
HMGN1-212ENST00000479586 GCGRP47871 477 aa16.65■□□□□ 0.26
HMGN1-212ENST00000479586 TNFSF10P50591 281 aa16.65■□□□□ 0.26
HMGN1-212ENST00000479586 BOP1Q14137 746 aaKnown RBP16.65■□□□□ 0.26
HMGN1-212ENST00000479586 PDK1Q15118 436 aa16.65■□□□□ 0.26
HMGN1-212ENST00000479586 TEX44Q53QW1 395 aa16.65■□□□□ 0.26
HMGN1-212ENST00000479586 TTLL10Q6ZVT0 673 aa16.65■□□□□ 0.26
HMGN1-212ENST00000479586 FLVCR1-AS1Q8TAF5 88 aa16.65■□□□□ 0.26
HMGN1-212ENST00000479586 CTSFQ9UBX1 484 aa16.65■□□□□ 0.26
HMGN1-212ENST00000479586 SEC14L3Q9UDX4 400 aa16.65■□□□□ 0.26
HMGN1-212ENST00000479586 TRAV17A0A0B4J275 112 aa16.64■□□□□ 0.25
HMGN1-212ENST00000479586 A0A0J9YY10 115 aa16.64■□□□□ 0.25
HMGN1-212ENST00000479586 A0A1B0GX78 115 aa16.64■□□□□ 0.25
HMGN1-212ENST00000479586 DYTNA2CJ06 578 aa16.64■□□□□ 0.25
HMGN1-212ENST00000479586 PPP1R12AO14974 1030 aaPredicted RBP16.64■□□□□ 0.25
HMGN1-212ENST00000479586 PROSCO94903 275 aa16.64■□□□□ 0.25
HMGN1-212ENST00000479586 NFKB1P19838 968 aa16.64■□□□□ 0.25
HMGN1-212ENST00000479586 TLE4Q04727 773 aa16.64■□□□□ 0.25
HMGN1-212ENST00000479586 SLC1A5Q15758 541 aa16.64■□□□□ 0.25
HMGN1-212ENST00000479586 ZNF658BQ4V348 819 aaPredicted RBP16.64■□□□□ 0.25
HMGN1-212ENST00000479586 SLC9A4Q6AI14 798 aa16.64■□□□□ 0.25
HMGN1-212ENST00000479586 UNC5AQ6ZN44 842 aa16.64■□□□□ 0.25
HMGN1-212ENST00000479586 CEP97Q8IW35 865 aa16.64■□□□□ 0.25
HMGN1-212ENST00000479586 MMP21Q8N119 569 aa16.64■□□□□ 0.25
HMGN1-212ENST00000479586 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.64■□□□□ 0.25
HMGN1-212ENST00000479586 MTFMTQ96DP5 389 aaKnown RBP16.64■□□□□ 0.25
HMGN1-212ENST00000479586 DCUN1D1Q96GG9 259 aa16.64■□□□□ 0.25
HMGN1-212ENST00000479586 MRGPRX2Q96LB1 330 aa16.64■□□□□ 0.25
HMGN1-212ENST00000479586 TEKT5Q96M29 485 aa16.64■□□□□ 0.25
HMGN1-212ENST00000479586 SLC26A1Q9H2B4 701 aa16.64■□□□□ 0.25
HMGN1-212ENST00000479586 ASB8Q9H765 288 aa16.64■□□□□ 0.25
HMGN1-212ENST00000479586 ZNF160Q9HCG1 818 aa16.64■□□□□ 0.25
HMGN1-212ENST00000479586 FKBPLQ9UIM3 349 aa16.64■□□□□ 0.25
HMGN1-212ENST00000479586 PLCL2Q9UPR0 1127 aa16.64■□□□□ 0.25
HMGN1-212ENST00000479586 ARL5AQ9Y689 179 aa16.64■□□□□ 0.25
HMGN1-212ENST00000479586 STX7O15400 261 aaKnown RBP16.63■□□□□ 0.25
HMGN1-212ENST00000479586 WISP2O76076 250 aa16.63■□□□□ 0.25
HMGN1-212ENST00000479586 SRP72O76094 671 aaKnown RBP16.63■□□□□ 0.25
HMGN1-212ENST00000479586 NADKO95544 446 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms