RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 CD200R1Q8TD46 325 aa6.7□□□□□ -1.34
BRCA1-215ENST00000478531 CDKL2Q92772 493 aa6.7□□□□□ -1.34
BRCA1-215ENST00000478531 GRAMD1AQ96CP6 724 aa6.7□□□□□ -1.34
BRCA1-215ENST00000478531 ELMO2Q96JJ3 720 aa6.7□□□□□ -1.34
BRCA1-215ENST00000478531 FOPNLQ96NB1 174 aa6.7□□□□□ -1.34
BRCA1-215ENST00000478531 CMKLR1Q99788 373 aa6.7□□□□□ -1.34
BRCA1-215ENST00000478531 TMEM121BQ9BXQ6 578 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-215ENST00000478531 PHACTR1Q9C0D0 580 aa6.7□□□□□ -1.34
BRCA1-215ENST00000478531 NRSN2Q9GZP1 204 aa6.7□□□□□ -1.34
BRCA1-215ENST00000478531 CCDC86Q9H6F5 360 aaKnown RBP6.7□□□□□ -1.34
BRCA1-215ENST00000478531 LATS2Q9NRM7 1088 aa6.7□□□□□ -1.34
BRCA1-215ENST00000478531 WDR70Q9NW82 654 aa6.7□□□□□ -1.34
BRCA1-215ENST00000478531 TAS2R13Q9NYV9 303 aa6.7□□□□□ -1.34
BRCA1-215ENST00000478531 MOCS1Q9NZB8 636 aa6.7□□□□□ -1.34
BRCA1-215ENST00000478531 TXNDC16Q9P2K2 825 aa6.7□□□□□ -1.34
BRCA1-215ENST00000478531 ICKQ9UPZ9 632 aa6.7□□□□□ -1.34
BRCA1-215ENST00000478531 MED16Q9Y2X0 877 aa6.7□□□□□ -1.34
BRCA1-215ENST00000478531 COMMD10Q9Y6G5 202 aa6.7□□□□□ -1.34
BRCA1-215ENST00000478531 CHD6Q8TD26 2715 aa6.7□□□□□ -1.34
BRCA1-215ENST00000478531 CACNA1BQ00975 2339 aa6.7□□□□□ -1.34
BRCA1-215ENST00000478531 EFCAB7A8K855 629 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 CXorf49A8MYA2 514 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-215ENST00000478531 BTN3A1O00481 513 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 HGSO14964 777 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-215ENST00000478531 ZNF500O60304 480 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-215ENST00000478531 TNFSF15O95150 251 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 RBMS1P29558 406 aaKnown RBP6.69□□□□□ -1.34
BRCA1-215ENST00000478531 ECHS1P30084 290 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 STX2P32856 288 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 EIF3IQ13347 325 aaKnown RBP6.69□□□□□ -1.34
BRCA1-215ENST00000478531 SQSTM1Q13501 440 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 EFTUD2Q15029 972 aaKnown RBP eCLIP6.69□□□□□ -1.34
BRCA1-215ENST00000478531 KBTBD12Q3ZCT8 623 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 UBAP2Q5T6F2 1119 aaKnown RBP6.69□□□□□ -1.34
BRCA1-215ENST00000478531 HECTD2Q5U5R9 776 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 CACHD1Q5VU97 1274 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 UNC5DQ6UXZ4 953 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 PIWIL4Q7Z3Z4 852 aaKnown RBP6.69□□□□□ -1.34
BRCA1-215ENST00000478531 GALNT7Q86SF2 657 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 AMIGO1Q86WK6 493 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 DCUN1D3Q8IWE4 304 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 GSPT2Q8IYD1 628 aaKnown RBP6.69□□□□□ -1.34
BRCA1-215ENST00000478531 C2orf73Q8N5S3 287 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-215ENST00000478531 LMNTD1Q8N9Z9 388 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 AGBL5Q8NDL9 886 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 FBF1Q8TES7 1133 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 ZFPM2Q8WW38 1151 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 MRRFQ96E11 262 aaKnown RBP6.69□□□□□ -1.34
BRCA1-215ENST00000478531 ZDHHC12Q96GR4 267 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 PPM1MQ96MI6 270 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 DCBLD2Q96PD2 775 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 L2HGDHQ9H9P8 463 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 LRRC4CQ9HCJ2 640 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 SMYD2Q9NRG4 433 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 POLG2Q9UHN1 485 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 NFU1Q9UMS0 254 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 FAM95CA0A1B0GW59 222 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 BTN3A3O00478 584 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 KDM1AO60341 852 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 ACSL3O95573 720 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 C9P02748 559 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 GSTA2P09210 222 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 CCL4P13236 92 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 CDH3P22223 829 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 ATP5DP30049 168 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 SHMT2P34897 504 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 DEKP35659 375 aaKnown RBP6.69□□□□□ -1.34
BRCA1-215ENST00000478531 ETV5P41161 510 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 LSSP48449 732 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 KPNA2P52292 529 aaKnown RBP6.69□□□□□ -1.34
BRCA1-215ENST00000478531 TIAL1Q01085 375 aaKnown RBP eCLIP6.69□□□□□ -1.34
BRCA1-215ENST00000478531 TRA2AQ13595 282 aaKnown RBP eCLIP6.69□□□□□ -1.34
BRCA1-215ENST00000478531 GBX1Q14549 363 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 ZNF460Q14592 562 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 RTP5Q14D33 572 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 KYNUQ16719 465 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 CCSMST1Q4G0I0 132 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 FAM45BPQ6NSW5 357 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 UGT3A1Q6NUS8 523 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 TTC23LQ6PF05 361 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 FBXO38Q6PIJ6 1188 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 PAQR3Q6TCH7 311 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 SLC26A11Q86WA9 606 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 ZC3HC1Q86WB0 502 aaKnown RBP6.69□□□□□ -1.34
BRCA1-215ENST00000478531 IFT20Q8IY31 132 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 PPM1NQ8N819 430 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 FAM45AQ8TCE6 357 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 INPP5DQ92835 1189 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 PMEPA1Q969W9 287 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 RNF31Q96EP0 1072 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 VPS39Q96JC1 886 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 IL17FQ96PD4 163 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 MAP3K3Q99759 626 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 OLFM1Q99784 485 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 FAM129AQ9BZQ8 928 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 KLHL25Q9H0H3 589 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 CDC42EP4Q9H3Q1 356 aaKnown RBP6.69□□□□□ -1.34
BRCA1-215ENST00000478531 TFB2MQ9H5Q4 396 aaKnown RBP6.69□□□□□ -1.34
BRCA1-215ENST00000478531 OCIAD1Q9NX40 245 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 SOHLH2Q9NX45 425 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms