RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 MVB12BQ9H7P6 319 aa18.29■□□□□ 0.52
SORT1-203ENST00000471996 MRM3Q9HC36 420 aaKnown RBP18.29■□□□□ 0.52
SORT1-203ENST00000471996 FAM153AQ9UHL3 310 aa18.29■□□□□ 0.52
SORT1-203ENST00000471996 CNTRLQ7Z7A1 2325 aa18.29■□□□□ 0.52
SORT1-203ENST00000471996 PCNX1Q96RV3 2341 aa18.28■□□□□ 0.52
SORT1-203ENST00000471996 C19orf84I3L1E1 186 aa18.28■□□□□ 0.52
SORT1-203ENST00000471996 IFRD1O00458 451 aaPredicted RBP18.28■□□□□ 0.52
SORT1-203ENST00000471996 UNC5CO95185 931 aa18.28■□□□□ 0.52
SORT1-203ENST00000471996 PRAMEF1O95521 474 aa18.28■□□□□ 0.52
SORT1-203ENST00000471996 ONECUT2O95948 504 aa18.28■□□□□ 0.52
SORT1-203ENST00000471996 ALBP02768 609 aa18.28■□□□□ 0.52
SORT1-203ENST00000471996 UGT2B7P16662 529 aa18.28■□□□□ 0.52
SORT1-203ENST00000471996 ITGAXP20702 1163 aa18.28■□□□□ 0.52
SORT1-203ENST00000471996 AGAP20933 346 aa18.28■□□□□ 0.52
SORT1-203ENST00000471996 ALAS2P22557 587 aa18.28■□□□□ 0.52
SORT1-203ENST00000471996 CHRNA4P43681 627 aa18.28■□□□□ 0.52
SORT1-203ENST00000471996 WNT3AP56704 352 aa18.28■□□□□ 0.52
SORT1-203ENST00000471996 ARG2P78540 354 aa18.28■□□□□ 0.52
SORT1-203ENST00000471996 TMPRSS15P98073 1019 aa18.28■□□□□ 0.52
SORT1-203ENST00000471996 NKG7Q16617 165 aa18.28■□□□□ 0.52
SORT1-203ENST00000471996 SLC5A12Q1EHB4 618 aa18.28■□□□□ 0.52
SORT1-203ENST00000471996 KDELC1Q6UW63 502 aa18.28■□□□□ 0.52
SORT1-203ENST00000471996 OR11G2Q8NGC1 345 aa18.28■□□□□ 0.52
SORT1-203ENST00000471996 RAPGEF5Q92565 580 aa18.28■□□□□ 0.52
SORT1-203ENST00000471996 VPS50Q96JG6 964 aa18.28■□□□□ 0.52
SORT1-203ENST00000471996 OLFM3Q96PB7 478 aa18.28■□□□□ 0.52
SORT1-203ENST00000471996 OR2A14Q96R47 310 aa18.28■□□□□ 0.52
SORT1-203ENST00000471996 HSD3B7Q9H2F3 369 aa18.28■□□□□ 0.52
SORT1-203ENST00000471996 IRAK4Q9NWZ3 460 aa18.28■□□□□ 0.52
SORT1-203ENST00000471996 TRAV17A0A0B4J275 112 aa18.27■□□□□ 0.52
SORT1-203ENST00000471996 C17orf113A0A1B0GUU1 675 aa18.27■□□□□ 0.52
SORT1-203ENST00000471996 KDELR1P24390 212 aa18.27■□□□□ 0.52
SORT1-203ENST00000471996 CD151P48509 253 aa18.27■□□□□ 0.52
SORT1-203ENST00000471996 PRLHRP49683 370 aa18.27■□□□□ 0.52
SORT1-203ENST00000471996 ADORA2A-AS1P86434 159 aa18.27■□□□□ 0.52
SORT1-203ENST00000471996 PRKG2Q13237 762 aa18.27■□□□□ 0.52
SORT1-203ENST00000471996 PTPRCAPQ14761 206 aa18.27■□□□□ 0.52
SORT1-203ENST00000471996 DNAJC22Q8N4W6 341 aa18.27■□□□□ 0.52
SORT1-203ENST00000471996 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.27■□□□□ 0.52
SORT1-203ENST00000471996 DLG3Q92796 817 aa18.27■□□□□ 0.52
SORT1-203ENST00000471996 TEKT5Q96M29 485 aa18.27■□□□□ 0.52
SORT1-203ENST00000471996 HGH1Q9BTY7 390 aa18.27■□□□□ 0.52
SORT1-203ENST00000471996 SLC26A1Q9H2B4 701 aa18.27■□□□□ 0.52
SORT1-203ENST00000471996 ASB8Q9H765 288 aa18.27■□□□□ 0.52
SORT1-203ENST00000471996 COG4Q9H9E3 785 aa18.27■□□□□ 0.52
SORT1-203ENST00000471996 SH3BGRL2Q9UJC5 107 aa18.27■□□□□ 0.52
SORT1-203ENST00000471996 PLCL2Q9UPR0 1127 aa18.27■□□□□ 0.52
SORT1-203ENST00000471996 ICKQ9UPZ9 632 aa18.27■□□□□ 0.52
SORT1-203ENST00000471996 DOCK10Q96BY6 2186 aa18.27■□□□□ 0.51
SORT1-203ENST00000471996 PPP1R12AO14974 1030 aaPredicted RBP18.26■□□□□ 0.51
SORT1-203ENST00000471996 STX7O15400 261 aaKnown RBP18.26■□□□□ 0.51
SORT1-203ENST00000471996 PROSCO94903 275 aa18.26■□□□□ 0.51
SORT1-203ENST00000471996 PIM1P11309 404 aaPredicted RBP18.26■□□□□ 0.51
SORT1-203ENST00000471996 KIR3DL1P43629 444 aa18.26■□□□□ 0.51
SORT1-203ENST00000471996 TNNT3P45378 269 aaPredicted RBP18.26■□□□□ 0.51
SORT1-203ENST00000471996 GCGRP47871 477 aa18.26■□□□□ 0.51
SORT1-203ENST00000471996 TNFSF10P50591 281 aa18.26■□□□□ 0.51
SORT1-203ENST00000471996 BOP1Q14137 746 aaKnown RBP18.26■□□□□ 0.51
SORT1-203ENST00000471996 RBBP7Q16576 425 aa18.26■□□□□ 0.51
SORT1-203ENST00000471996 SLC9A4Q6AI14 798 aa18.26■□□□□ 0.51
SORT1-203ENST00000471996 MTFMTQ96DP5 389 aaKnown RBP18.26■□□□□ 0.51
SORT1-203ENST00000471996 DCUN1D1Q96GG9 259 aa18.26■□□□□ 0.51
SORT1-203ENST00000471996 SEMA3GQ9NS98 782 aa18.26■□□□□ 0.51
SORT1-203ENST00000471996 ABI3Q9P2A4 366 aa18.26■□□□□ 0.51
SORT1-203ENST00000471996 SEC14L3Q9UDX4 400 aa18.26■□□□□ 0.51
SORT1-203ENST00000471996 NUP210LQ5VU65 1888 aa18.26■□□□□ 0.51
SORT1-203ENST00000471996 A0A0J9YY10 115 aa18.25■□□□□ 0.51
SORT1-203ENST00000471996 A0A1B0GX78 115 aa18.25■□□□□ 0.51
SORT1-203ENST00000471996 DYTNA2CJ06 578 aa18.25■□□□□ 0.51
SORT1-203ENST00000471996 SRP72O76094 671 aaKnown RBP18.25■□□□□ 0.51
SORT1-203ENST00000471996 RALBP11234 206 aa18.25■□□□□ 0.51
SORT1-203ENST00000471996 PTPN3P26045 913 aa18.25■□□□□ 0.51
SORT1-203ENST00000471996 MST1P26927 711 aa18.25■□□□□ 0.51
SORT1-203ENST00000471996 PDHA2P29803 388 aa18.25■□□□□ 0.51
SORT1-203ENST00000471996 CD68P34810 354 aaPredicted RBP18.25■□□□□ 0.51
SORT1-203ENST00000471996 ARSFP54793 590 aa18.25■□□□□ 0.51
SORT1-203ENST00000471996 SLC1A5Q15758 541 aa18.25■□□□□ 0.51
SORT1-203ENST00000471996 NPNTQ6UXI9 565 aa18.25■□□□□ 0.51
SORT1-203ENST00000471996 UNC5AQ6ZN44 842 aa18.25■□□□□ 0.51
SORT1-203ENST00000471996 SHISA6Q6ZSJ9 500 aa18.25■□□□□ 0.51
SORT1-203ENST00000471996 TTLL10Q6ZVT0 673 aa18.25■□□□□ 0.51
SORT1-203ENST00000471996 FLVCR1-AS1Q8TAF5 88 aa18.25■□□□□ 0.51
SORT1-203ENST00000471996 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.25■□□□□ 0.51
SORT1-203ENST00000471996 TFGQ92734 400 aaPredicted RBP18.25■□□□□ 0.51
SORT1-203ENST00000471996 MRGPRX2Q96LB1 330 aa18.25■□□□□ 0.51
SORT1-203ENST00000471996 SOX17Q9H6I2 414 aaPredicted RBP18.25■□□□□ 0.51
SORT1-203ENST00000471996 MCCC2Q9HCC0 563 aa18.25■□□□□ 0.51
SORT1-203ENST00000471996 PLA2G3Q9NZ20 509 aa18.25■□□□□ 0.51
SORT1-203ENST00000471996 NXT1Q9UKK6 140 aaKnown RBP18.25■□□□□ 0.51
SORT1-203ENST00000471996 ANKRD12Q6UB98 2062 aa18.25■□□□□ 0.51
SORT1-203ENST00000471996 ZNF487B1APH4 448 aa18.24■□□□□ 0.51
SORT1-203ENST00000471996 APOL1O14791 398 aa18.24■□□□□ 0.51
SORT1-203ENST00000471996 CRYABP02511 175 aaKnown RBP18.24■□□□□ 0.51
SORT1-203ENST00000471996 CD1EP15812 388 aa18.24■□□□□ 0.51
SORT1-203ENST00000471996 HOXB4P17483 251 aaPredicted RBP18.24■□□□□ 0.51
SORT1-203ENST00000471996 SMSP52788 366 aa18.24■□□□□ 0.51
SORT1-203ENST00000471996 TLE4Q04727 773 aa18.24■□□□□ 0.51
SORT1-203ENST00000471996 RBPJQ06330 500 aa18.24■□□□□ 0.51
SORT1-203ENST00000471996 ZNF658BQ4V348 819 aaPredicted RBP18.24■□□□□ 0.51
SORT1-203ENST00000471996 COX15Q7KZN9 410 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms