RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 ZBTB18Q99592 522 aa12.73□□□□□ -0.37
PDZRN3-205ENST00000466780 IPPKQ9H8X2 491 aa12.73□□□□□ -0.37
PDZRN3-205ENST00000466780 TSC22D4Q9Y3Q8 395 aa12.73□□□□□ -0.37
PDZRN3-205ENST00000466780 PKP3Q9Y446 797 aa12.73□□□□□ -0.37
PDZRN3-205ENST00000466780 FFAR3O14843 346 aa12.73□□□□□ -0.37
PDZRN3-205ENST00000466780 AREL1O15033 823 aa12.73□□□□□ -0.37
PDZRN3-205ENST00000466780 GPR42O15529 346 aa12.73□□□□□ -0.37
PDZRN3-205ENST00000466780 MYO1DO94832 1006 aa12.73□□□□□ -0.37
PDZRN3-205ENST00000466780 IGFBP5P24593 272 aa12.73□□□□□ -0.37
PDZRN3-205ENST00000466780 PSMB9P28065 219 aa12.73□□□□□ -0.37
PDZRN3-205ENST00000466780 MAPKAPK2P49137 400 aa12.73□□□□□ -0.37
PDZRN3-205ENST00000466780 CLCN7P51798 805 aa12.73□□□□□ -0.37
PDZRN3-205ENST00000466780 PURAQ00577 322 aaKnown RBP12.73□□□□□ -0.37
PDZRN3-205ENST00000466780 SMN1Q16637 294 aaKnown RBP12.73□□□□□ -0.37
PDZRN3-205ENST00000466780 RFX4Q33E94 735 aa12.73□□□□□ -0.37
PDZRN3-205ENST00000466780 CARD16Q5EG05 197 aa12.73□□□□□ -0.37
PDZRN3-205ENST00000466780 CPZQ66K79 652 aa12.73□□□□□ -0.37
PDZRN3-205ENST00000466780 CALHM3Q86XJ0 350 aa12.73□□□□□ -0.37
PDZRN3-205ENST00000466780 LIX1Q8N485 282 aa12.73□□□□□ -0.37
PDZRN3-205ENST00000466780 TTC9BQ8N6N2 239 aa12.73□□□□□ -0.37
PDZRN3-205ENST00000466780 OR7D4Q8NG98 312 aa12.73□□□□□ -0.37
PDZRN3-205ENST00000466780 KATNAL1Q9BW62 490 aa12.73□□□□□ -0.37
PDZRN3-205ENST00000466780 ZFP14Q9HCL3 533 aa12.73□□□□□ -0.37
PDZRN3-205ENST00000466780 C2orf81A6NN90 581 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 TYMPP19971 482 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 CD40LGP29965 261 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 SERPINB10P48595 397 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 TTPAP49638 278 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 ZRANB3Q5FWF4 1079 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 CES5AQ6NT32 575 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 SHQ1Q6PI26 577 aaKnown RBP12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 SUSD1Q6UWL2 747 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 CEP68Q76N32 757 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 MILR1Q7Z6M3 343 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 DPY30Q9C005 99 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 RIBC2Q9H4K1 309 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 NSUN3Q9H649 340 aaKnown RBP12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 ELOVL2Q9NXB9 296 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 MARCH2Q9P0N8 246 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 VPS51Q9UID3 782 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 EIF3LQ9Y262 564 aaKnown RBP12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 RBMX2Q9Y388 322 aaKnown RBP12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 ORC6Q9Y5N6 252 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 GREB1Q4ZG55 1949 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 SLC12A8A0AV02 714 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 FAM220BPB1ANY3 271 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 E5RI56 91 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 TAPBPO15533 448 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 B4GALT3O60512 393 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 FADS2O95864 444 aaKnown RBP12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 OTCP00480 354 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 LPOP22079 712 aaPredicted RBP12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 HSPA7P48741 367 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 DAPP51397 102 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 HUNKP57058 714 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 PHC1P78364 1004 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 MORN1Q5T089 497 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 CAPN13Q6MZZ7 669 aaPredicted RBP12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 PAGE2Q7Z2X7 111 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 TTC16Q8NEE8 873 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 LPCAT1Q8NF37 534 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 CCDC97Q96F63 343 aaPredicted RBP12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 CPPED1Q9BRF8 314 aaPredicted RBP12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 DSN1Q9H410 356 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 FBXO44Q9H4M3 255 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 CLMPQ9H6B4 373 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 RMND5AQ9H871 391 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 SLCO3A1Q9UIG8 710 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 POU2F3Q9UKI9 436 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 VPS9D1Q9Y2B5 631 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 TPRKBQ9Y3C4 175 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 CHD5Q8TDI0 1954 aa12.72□□□□□ -0.37
PDZRN3-205ENST00000466780 PFDN6O15212 129 aa12.71□□□□□ -0.37
PDZRN3-205ENST00000466780 CELF2O95319 508 aaKnown RBP12.71□□□□□ -0.37
PDZRN3-205ENST00000466780 IGLV3-27P01718 113 aa12.71□□□□□ -0.37
PDZRN3-205ENST00000466780 IL6P05231 212 aa12.71□□□□□ -0.37
PDZRN3-205ENST00000466780 GRK3P35626 688 aa12.71□□□□□ -0.37
PDZRN3-205ENST00000466780 CLCN4P51793 760 aa12.71□□□□□ -0.37
PDZRN3-205ENST00000466780 TPTEP56180 551 aa12.71□□□□□ -0.37
PDZRN3-205ENST00000466780 DEPDC1Q5TB30 811 aa12.71□□□□□ -0.37
PDZRN3-205ENST00000466780 ATG9BQ674R7 924 aa12.71□□□□□ -0.37
PDZRN3-205ENST00000466780 LRRC8DQ7L1W4 858 aa12.71□□□□□ -0.37
PDZRN3-205ENST00000466780 LGI2Q8N0V4 545 aa12.71□□□□□ -0.37
PDZRN3-205ENST00000466780 C2orf69Q8N8R5 385 aa12.71□□□□□ -0.37
PDZRN3-205ENST00000466780 SETD9Q8NE22 299 aa12.71□□□□□ -0.37
PDZRN3-205ENST00000466780 CLHC1Q8NHS4 586 aa12.71□□□□□ -0.37
PDZRN3-205ENST00000466780 RHOXF1Q8NHV9 184 aa12.71□□□□□ -0.37
PDZRN3-205ENST00000466780 TRIB2Q92519 343 aa12.71□□□□□ -0.37
PDZRN3-205ENST00000466780 PYURFQ96I23 114 aa12.71□□□□□ -0.37
PDZRN3-205ENST00000466780 PSKH2Q96QS6 385 aa12.71□□□□□ -0.37
PDZRN3-205ENST00000466780 OR52E6Q96RD3 313 aa12.71□□□□□ -0.37
PDZRN3-205ENST00000466780 SH3GL1Q99961 368 aa12.71□□□□□ -0.37
PDZRN3-205ENST00000466780 ASPSCR1Q9BZE9 553 aa12.71□□□□□ -0.37
PDZRN3-205ENST00000466780 TNKS2Q9H2K2 1166 aa12.71□□□□□ -0.37
PDZRN3-205ENST00000466780 SPC25Q9HBM1 224 aa12.71□□□□□ -0.37
PDZRN3-205ENST00000466780 ACOT13Q9NPJ3 140 aa12.71□□□□□ -0.37
PDZRN3-205ENST00000466780 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.71□□□□□ -0.37
PDZRN3-205ENST00000466780 C1orf109Q9NX04 203 aa12.71□□□□□ -0.37
PDZRN3-205ENST00000466780 TNPO3Q9Y5L0 923 aaKnown RBP12.71□□□□□ -0.37
PDZRN3-205ENST00000466780 MYADML2A6NDP7 307 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms