RNA–Protein interactions for RNA: ENST00000466048.6

USP54-210, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 4,674 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-210ENST00000466048 ATXN1LP0C7T5 689 aaKnown RBP7.52□□□□□ -1.21
USP54-210ENST00000466048 ITGAXP20702 1163 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 RRM2P31350 389 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 HSD17B2P37059 387 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 CHRNA4P43681 627 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 HPCAP84074 193 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 GSTM4Q03013 218 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 TCEA2Q15560 299 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 CACHD1Q5VU97 1274 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 NIPAL1Q6NVV3 410 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.52□□□□□ -1.21
USP54-210ENST00000466048 ADAMTSL2Q86TH1 951 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 STK32CQ86UX6 486 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 PSMA8Q8TAA3 256 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 RAB2BQ8WUD1 216 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 STARD8Q92502 1023 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 RNFT2Q96EX2 444 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 YTHDF1Q9BYJ9 559 aaKnown RBP7.52□□□□□ -1.21
USP54-210ENST00000466048 C12orf65Q9H3J6 166 aaKnown RBP7.52□□□□□ -1.21
USP54-210ENST00000466048 MUC13Q9H3R2 512 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 FBXO6Q9NRD1 293 aaPredicted RBP7.52□□□□□ -1.21
USP54-210ENST00000466048 EHD3Q9NZN3 535 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 NOTOA8MTQ0 251 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 UPK3BL1B0FP48 263 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 UPK3BL2E5RIL1 263 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 PRMT5O14744 637 aaPredicted RBP7.52□□□□□ -1.21
USP54-210ENST00000466048 WNT9AO14904 365 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 NOS1APO75052 506 aaPredicted RBP7.52□□□□□ -1.21
USP54-210ENST00000466048 STX11O75558 287 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 ZBTB11O95625 1053 aaPredicted RBP7.52□□□□□ -1.21
USP54-210ENST00000466048 APBB3O95704 486 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 ANXA5P08758 320 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 COX4I1P13073 169 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 GSSP48637 474 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 MNX1P50219 401 aaPredicted RBP7.52□□□□□ -1.21
USP54-210ENST00000466048 FASTKQ14296 549 aaKnown RBP7.52□□□□□ -1.21
USP54-210ENST00000466048 MYLK3Q32MK0 819 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 COL13A1Q5TAT6 717 aaPredicted RBP7.52□□□□□ -1.21
USP54-210ENST00000466048 SYCE2Q6PIF2 218 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 KRT78Q8N1N4 520 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 LRRC20Q8TCA0 184 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 KCTD4Q8WVF5 259 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 RTKNQ9BST9 563 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 CAB39LQ9H9S4 337 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 POLG2Q9UHN1 485 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 ZNHIT2Q9UHR6 403 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 CA14Q9ULX7 337 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 GSTK1Q9Y2Q3 226 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 DCXO43602 365 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 C5AR1P21730 350 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 VIPR1P32241 457 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 ABL2P42684 1182 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 TNFRSF4P43489 277 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 LGALS3BPQ08380 585 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 FAM217AQ8IXS0 508 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.52□□□□□ -1.21
USP54-210ENST00000466048 ACTRT2Q8TDY3 377 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 ELMO1Q92556 727 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 EXOC2Q96KP1 924 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 MCMBPQ9BTE3 642 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 TDRD1Q9BXT4 1180 aaKnown RBP7.52□□□□□ -1.21
USP54-210ENST00000466048 GSDMCQ9BYG8 508 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 FBXL12Q9NXK8 326 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 TAS2R1Q9NYW7 299 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 TMEM9Q9P0T7 183 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 BAIAP2Q9UQB8 552 aa7.52□□□□□ -1.21
USP54-210ENST00000466048 A0A0D9SEW6 157 aa7.51□□□□□ -1.21
USP54-210ENST00000466048 C2orf78A6NCI8 922 aa7.51□□□□□ -1.21
USP54-210ENST00000466048 INPP4BO15327 924 aa7.51□□□□□ -1.21
USP54-210ENST00000466048 NADKO95544 446 aaPredicted RBP7.51□□□□□ -1.21
USP54-210ENST00000466048 KLF8O95600 359 aaPredicted RBP7.51□□□□□ -1.21
USP54-210ENST00000466048 VIPP01282 170 aa7.51□□□□□ -1.21
USP54-210ENST00000466048 MZF1P28698 734 aaPredicted RBP7.51□□□□□ -1.21
USP54-210ENST00000466048 CXCL12P48061 93 aa7.51□□□□□ -1.21
USP54-210ENST00000466048 TAS2R39P59534 338 aa7.51□□□□□ -1.21
USP54-210ENST00000466048 BOP1Q14137 746 aaKnown RBP7.51□□□□□ -1.21
USP54-210ENST00000466048 GALNT3Q14435 633 aa7.51□□□□□ -1.21
USP54-210ENST00000466048 CYP51A1Q16850 503 aa7.51□□□□□ -1.21
USP54-210ENST00000466048 ATP6AP1LQ52LC2 224 aa7.51□□□□□ -1.21
USP54-210ENST00000466048 ANO7Q6IWH7 933 aa7.51□□□□□ -1.21
USP54-210ENST00000466048 NCEH1Q6PIU2 408 aa7.51□□□□□ -1.21
USP54-210ENST00000466048 C16orf62Q7Z3J2 963 aa7.51□□□□□ -1.21
USP54-210ENST00000466048 DENND6AQ8IWF6 608 aa7.51□□□□□ -1.21
USP54-210ENST00000466048 PGBD5Q8N414 524 aa7.51□□□□□ -1.21
USP54-210ENST00000466048 ATG16L2Q8NAA4 619 aa7.51□□□□□ -1.21
USP54-210ENST00000466048 AP3S1Q92572 193 aa7.51□□□□□ -1.21
USP54-210ENST00000466048 MYDGFQ969H8 173 aa7.51□□□□□ -1.21
USP54-210ENST00000466048 ZSCAN5AQ9BUG6 496 aa7.51□□□□□ -1.21
USP54-210ENST00000466048 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.51□□□□□ -1.21
USP54-210ENST00000466048 IL1RL2Q9HB29 575 aa7.51□□□□□ -1.21
USP54-210ENST00000466048 SLC2A6Q9UGQ3 507 aa7.51□□□□□ -1.21
USP54-210ENST00000466048 TMCC3Q9ULS5 477 aa7.51□□□□□ -1.21
USP54-210ENST00000466048 HDAC3O15379 428 aa7.51□□□□□ -1.21
USP54-210ENST00000466048 KCNJ13O60928 360 aa7.51□□□□□ -1.21
USP54-210ENST00000466048 CDK14O94921 469 aa7.51□□□□□ -1.21
USP54-210ENST00000466048 GOT2P00505 430 aaKnown RBP7.51□□□□□ -1.21
USP54-210ENST00000466048 SLC35E2BP0CK96 405 aa7.51□□□□□ -1.21
USP54-210ENST00000466048 CSHL1Q14406 222 aa7.51□□□□□ -1.21
USP54-210ENST00000466048 Q6ZNB5 142 aa7.51□□□□□ -1.21
USP54-210ENST00000466048 CYP2U1Q7Z449 544 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms