RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 RBBP7Q16576 425 aa9.05□□□□□ -0.96
APP-213ENST00000464867 NKAIN1Q4KMZ8 207 aa9.05□□□□□ -0.96
APP-213ENST00000464867 ANKRD20A8PQ5CZ79 823 aa9.05□□□□□ -0.96
APP-213ENST00000464867 RHBDD2Q6NTF9 364 aa9.05□□□□□ -0.96
APP-213ENST00000464867 TTI2Q6NXR4 508 aa9.05□□□□□ -0.96
APP-213ENST00000464867 GBP6Q6ZN66 633 aa9.05□□□□□ -0.96
APP-213ENST00000464867 Q6ZPB1 254 aaPredicted RBP9.05□□□□□ -0.96
APP-213ENST00000464867 TRIM59Q8IWR1 403 aa9.05□□□□□ -0.96
APP-213ENST00000464867 CLYBLQ8N0X4 340 aa9.05□□□□□ -0.96
APP-213ENST00000464867 GPR150Q8NGU9 434 aa9.05□□□□□ -0.96
APP-213ENST00000464867 GOT1L1Q8NHS2 421 aaPredicted RBP9.05□□□□□ -0.96
APP-213ENST00000464867 AGAP11Q8TF27 550 aa9.05□□□□□ -0.96
APP-213ENST00000464867 THAP3Q8WTV1 239 aaPredicted RBP9.05□□□□□ -0.96
APP-213ENST00000464867 ASB5Q8WWX0 329 aa9.05□□□□□ -0.96
APP-213ENST00000464867 DHTKD1Q96HY7 919 aaPredicted RBP9.05□□□□□ -0.96
APP-213ENST00000464867 VKORC1Q9BQB6 163 aa9.05□□□□□ -0.96
APP-213ENST00000464867 SCAND2PQ9GZW5 306 aaPredicted RBP9.05□□□□□ -0.96
APP-213ENST00000464867 KCNJ16Q9NPI9 418 aa9.05□□□□□ -0.96
APP-213ENST00000464867 IMP3Q9NV31 184 aaKnown RBP9.05□□□□□ -0.96
APP-213ENST00000464867 IRAK4Q9NWZ3 460 aa9.05□□□□□ -0.96
APP-213ENST00000464867 RCOR1Q9UKL0 485 aa9.05□□□□□ -0.96
APP-213ENST00000464867 FZD10Q9ULW2 581 aa9.05□□□□□ -0.96
APP-213ENST00000464867 WDR37Q9Y2I8 494 aa9.05□□□□□ -0.96
APP-213ENST00000464867 ZNF835Q9Y2P0 537 aa9.05□□□□□ -0.96
APP-213ENST00000464867 IDSB3KWA1 339 aa9.04□□□□□ -0.96
APP-213ENST00000464867 FAM227AF5H4B4 570 aa9.04□□□□□ -0.96
APP-213ENST00000464867 PRRG2O14669 202 aa9.04□□□□□ -0.96
APP-213ENST00000464867 ZRANB2O95218 330 aaKnown RBP eCLIP9.04□□□□□ -0.96
APP-213ENST00000464867 SMC2O95347 1197 aa9.04□□□□□ -0.96
APP-213ENST00000464867 LY6G6DO95868 133 aa9.04□□□□□ -0.96
APP-213ENST00000464867 HOXD4P09016 255 aaPredicted RBP9.04□□□□□ -0.96
APP-213ENST00000464867 PIM1P11309 404 aaPredicted RBP9.04□□□□□ -0.96
APP-213ENST00000464867 POLR2CP19387 275 aaPredicted RBP9.04□□□□□ -0.96
APP-213ENST00000464867 SLC9A1P19634 815 aa9.04□□□□□ -0.96
APP-213ENST00000464867 HLA-DPA1P20036 260 aa9.04□□□□□ -0.96
APP-213ENST00000464867 PPP1R2P41236 205 aa9.04□□□□□ -0.96
APP-213ENST00000464867 EIF1AXP47813 144 aaKnown RBP9.04□□□□□ -0.96
APP-213ENST00000464867 LMAN1P49257 510 aa9.04□□□□□ -0.96
APP-213ENST00000464867 STX17P56962 302 aa9.04□□□□□ -0.96
APP-213ENST00000464867 MAXP61244 160 aa9.04□□□□□ -0.96
APP-213ENST00000464867 ITKQ08881 620 aa9.04□□□□□ -0.96
APP-213ENST00000464867 GALNT3Q14435 633 aa9.04□□□□□ -0.96
APP-213ENST00000464867 KRT33BQ14525 404 aa9.04□□□□□ -0.96
APP-213ENST00000464867 TAF3Q5VWG9 929 aa9.04□□□□□ -0.96
APP-213ENST00000464867 NAA35Q5VZE5 725 aa9.04□□□□□ -0.96
APP-213ENST00000464867 KIRREL2Q6UWL6 708 aa9.04□□□□□ -0.96
APP-213ENST00000464867 ARHGAP36Q6ZRI8 547 aa9.04□□□□□ -0.96
APP-213ENST00000464867 HOOK3Q86VS8 718 aa9.04□□□□□ -0.96
APP-213ENST00000464867 AMZ2Q86W34 360 aa9.04□□□□□ -0.96
APP-213ENST00000464867 TRAPPC5Q8IUR0 188 aa9.04□□□□□ -0.96
APP-213ENST00000464867 KBTBD2Q8IY47 623 aa9.04□□□□□ -0.96
APP-213ENST00000464867 WFDC11Q8NEX6 87 aa9.04□□□□□ -0.96
APP-213ENST00000464867 JOSD2Q8TAC2 188 aa9.04□□□□□ -0.96
APP-213ENST00000464867 GLYATL1Q969I3 302 aa9.04□□□□□ -0.96
APP-213ENST00000464867 MBD6Q96DN6 1003 aa9.04□□□□□ -0.96
APP-213ENST00000464867 PPM1MQ96MI6 270 aa9.04□□□□□ -0.96
APP-213ENST00000464867 TTC25Q96NG3 672 aa9.04□□□□□ -0.96
APP-213ENST00000464867 GSDMAQ96QA5 445 aa9.04□□□□□ -0.96
APP-213ENST00000464867 MGME1Q9BQP7 344 aa9.04□□□□□ -0.96
APP-213ENST00000464867 ZSCAN5AQ9BUG6 496 aa9.04□□□□□ -0.96
APP-213ENST00000464867 SELENOOQ9BVL4 669 aa9.04□□□□□ -0.96
APP-213ENST00000464867 FANCLQ9NW38 375 aa9.04□□□□□ -0.96
APP-213ENST00000464867 PTGFRNQ9P2B2 879 aa9.04□□□□□ -0.96
APP-213ENST00000464867 DNAJC12Q9UKB3 198 aa9.04□□□□□ -0.96
APP-213ENST00000464867 POMT2Q9UKY4 750 aa9.04□□□□□ -0.96
APP-213ENST00000464867 PSMD13Q9UNM6 376 aa9.04□□□□□ -0.96
APP-213ENST00000464867 BICDL2A1A5D9 508 aa9.03□□□□□ -0.96
APP-213ENST00000464867 EIF3CLB5ME19 914 aaKnown RBP9.03□□□□□ -0.96
APP-213ENST00000464867 SOCS6O14544 535 aa9.03□□□□□ -0.96
APP-213ENST00000464867 ADAM11O75078 769 aa9.03□□□□□ -0.96
APP-213ENST00000464867 PRAMEF1O95521 474 aa9.03□□□□□ -0.96
APP-213ENST00000464867 MTHFD1P11586 935 aaKnown RBP9.03□□□□□ -0.96
APP-213ENST00000464867 FSTP19883 344 aa9.03□□□□□ -0.96
APP-213ENST00000464867 FDXRP22570 491 aa9.03□□□□□ -0.96
APP-213ENST00000464867 MMP13P45452 471 aa9.03□□□□□ -0.96
APP-213ENST00000464867 FOXL2P58012 376 aa9.03□□□□□ -0.96
APP-213ENST00000464867 CACNG1Q06432 222 aa9.03□□□□□ -0.96
APP-213ENST00000464867 EXOC3L4Q17RC7 722 aa9.03□□□□□ -0.96
APP-213ENST00000464867 MARC1Q5VT66 337 aa9.03□□□□□ -0.96
APP-213ENST00000464867 PDPK2PQ6A1A2 396 aa9.03□□□□□ -0.96
APP-213ENST00000464867 NCCRP1Q6ZVX7 275 aaPredicted RBP9.03□□□□□ -0.96
APP-213ENST00000464867 ACAD11Q709F0 780 aa9.03□□□□□ -0.96
APP-213ENST00000464867 CREBRFQ8IUR6 639 aa9.03□□□□□ -0.96
APP-213ENST00000464867 ZNF547Q8IVP9 402 aa9.03□□□□□ -0.96
APP-213ENST00000464867 FAM71AQ8IYT1 594 aa9.03□□□□□ -0.96
APP-213ENST00000464867 PGBD5Q8N414 524 aa9.03□□□□□ -0.96
APP-213ENST00000464867 MYRIPQ8NFW9 859 aa9.03□□□□□ -0.96
APP-213ENST00000464867 SLC20A1Q8WUM9 679 aa9.03□□□□□ -0.96
APP-213ENST00000464867 GPR137Q96N19 417 aa9.03□□□□□ -0.96
APP-213ENST00000464867 SMIM14Q96QK8 99 aa9.03□□□□□ -0.96
APP-213ENST00000464867 WDR24Q96S15 920 aa9.03□□□□□ -0.96
APP-213ENST00000464867 EIF3CQ99613 913 aaKnown RBP9.03□□□□□ -0.96
APP-213ENST00000464867 ADAM19Q9H013 955 aa9.03□□□□□ -0.96
APP-213ENST00000464867 CLEC4MQ9H2X3 399 aaPredicted RBP9.03□□□□□ -0.96
APP-213ENST00000464867 LIME1Q9H400 295 aa9.03□□□□□ -0.96
APP-213ENST00000464867 WDR54Q9H977 334 aa9.03□□□□□ -0.96
APP-213ENST00000464867 RAD18Q9NS91 495 aa9.03□□□□□ -0.96
APP-213ENST00000464867 HAUS2Q9NVX0 235 aa9.03□□□□□ -0.96
APP-213ENST00000464867 SLC24A2Q9UI40 661 aa9.03□□□□□ -0.96
APP-213ENST00000464867 RNF112Q9ULX5 631 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms