RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 PYDC2Q56P42 97 aa10.55□□□□□ -0.72
AMBRA1-202ENST00000458649 FRMD7Q6ZUT3 714 aa10.55□□□□□ -0.72
AMBRA1-202ENST00000458649 ABHD13Q7L211 337 aa10.55□□□□□ -0.72
AMBRA1-202ENST00000458649 CIR1Q86X95 450 aaPredicted RBP10.55□□□□□ -0.72
AMBRA1-202ENST00000458649 MAGEE2Q8TD90 523 aaPredicted RBP10.55□□□□□ -0.72
AMBRA1-202ENST00000458649 ASB12Q8WXK4 309 aa10.55□□□□□ -0.72
AMBRA1-202ENST00000458649 ZBED3Q96IU2 234 aaPredicted RBP10.55□□□□□ -0.72
AMBRA1-202ENST00000458649 FCRL5Q96RD9 977 aa10.55□□□□□ -0.72
AMBRA1-202ENST00000458649 MCMBPQ9BTE3 642 aa10.55□□□□□ -0.72
AMBRA1-202ENST00000458649 FNDC11Q9BVV2 318 aa10.55□□□□□ -0.72
AMBRA1-202ENST00000458649 ZDHHC7Q9NXF8 308 aa10.55□□□□□ -0.72
AMBRA1-202ENST00000458649 NPEPPSL1A6NEC2 478 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 LOC110117498-PIK3R3F6TDL0 507 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 OR1F1O43749 312 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 TCF4P15884 667 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 RPS24P62847 133 aaKnown RBP10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 NATD1Q8N6N6 113 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 CAMKVQ8NCB2 501 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 FAM13CQ8NE31 585 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 OR4A15Q8NGL6 344 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 SLC35F5Q8WV83 523 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 ZNF285Q96NJ3 590 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 GPR21Q99679 349 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 C16orf70Q9BSU1 422 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 SSU72Q9NP77 194 aaKnown RBP10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 ZDHHC3Q9NYG2 299 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 ABCG2Q9UNQ0 655 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 FAM240BA0A1B0GVZ2 78 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 TLX3O43711 291 aaPredicted RBP10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 PLOD3O60568 738 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 SERPINA6P08185 405 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 MAPK12P53778 367 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 MYLK3Q32MK0 819 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 CCDC28AQ8IWP9 274 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 SLC43A3Q8NBI5 491 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 BPIFB6Q8NFQ5 453 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 NUP50Q9UKX7 468 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 ADAMTS5Q9UNA0 930 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 ITGB4P16144 1822 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 OR5K4A6NMS3 321 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 KMOO15229 486 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 ADSLP30566 484 aaPredicted RBP10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 MLLT1Q03111 559 aaPredicted RBP10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 BNIP2Q12982 314 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 GRM2Q14416 872 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 CNPY1Q3B7I2 92 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 PIF1Q9H611 641 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 HHATLQ9HCP6 504 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 FGFR3P22607 806 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 RCVRNP35243 200 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 UGT2B15P54855 530 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 CYP4F2P78329 520 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 ZNF33AQ06730 810 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 CARTPTQ16568 116 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 SYPL2Q5VXT5 272 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 KIAA0930Q6ICG6 404 aaPredicted RBP10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 FBXL22Q6P050 247 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 C22orf39Q6P5X5 142 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 SPAG16Q8N0X2 631 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 PTPRHQ9HD43 1115 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 FETUBQ9UGM5 382 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 C3orf18Q9UK00 162 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 USP54Q70EL1 1684 aa10.54□□□□□ -0.72
AMBRA1-202ENST00000458649 BBIP1A8MTZ0 92 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 TMEM63AO94886 807 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 ALDH4A1P30038 563 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 OGDHQ02218 1023 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 PTGES3Q15185 160 aaKnown RBP10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 LY6G5CQ5SRR4 150 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 DDI2Q5TDH0 399 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 SPATA6LQ8N4H0 392 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 ADCY4Q8NFM4 1077 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 MFSD3Q96ES6 412 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 LRTM1Q9HBL6 345 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 CCNB1IP1Q9NPC3 277 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 TEX28O15482 410 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 LYPLA1O75608 230 aaPredicted RBP10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 KLF8O95600 359 aaPredicted RBP10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 LDOC1O95751 146 aaPredicted RBP10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 PDX1P52945 283 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 RABGGTBP53611 331 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 NRLP54845 237 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 IFNLR1Q8IU57 520 aaPredicted RBP10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 ARMC8Q8IUR7 673 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 UBR7Q8N806 425 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 CLHC1Q8NHS4 586 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 SPATA22Q8NHS9 363 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 PHF10Q8WUB8 498 aaKnown RBP10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 EBF3Q9H4W6 596 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 TMEM138Q9NPI0 162 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 CUEDC1Q9NWM3 386 aaPredicted RBP10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 SIRPGQ9P1W8 387 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 FKBPLQ9UIM3 349 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 SERTAD3Q9UJW9 196 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 ZNF490Q9ULM2 529 aaPredicted RBP10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 FAM221BA6H8Z2 402 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 FOXO6A8MYZ6 492 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 ACP5P13686 325 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms