RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 RFXANKO14593 260 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 STX16O14662 325 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 B4GAT1O43505 415 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 F11P03951 625 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 ELFN1P0C7U0 828 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 CYP2A7P20853 494 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 SOAT1P35610 550 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 ACSM2AQ08AH3 577 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 ACSM2BQ68CK6 577 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 ERMP1Q7Z2K6 904 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 HID1Q8IV36 788 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 SLCO4A1Q96BD0 722 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 CENPNQ96H22 339 aaPredicted RBP11.72□□□□□ -0.53
SMPD4-213ENST00000454468 ARMC7Q9H6L4 198 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 SMOXQ9NWM0 555 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 GRM6O15303 877 aa11.71□□□□□ -0.53
SMPD4-213ENST00000454468 RSL1D1O76021 490 aaKnown RBP11.71□□□□□ -0.53
SMPD4-213ENST00000454468 PRKD3O94806 890 aa11.71□□□□□ -0.53
SMPD4-213ENST00000454468 TSPAN12O95859 305 aa11.71□□□□□ -0.53
SMPD4-213ENST00000454468 ANXA6P08133 673 aa11.71□□□□□ -0.53
SMPD4-213ENST00000454468 VARSP26640 1264 aaKnown RBP11.71□□□□□ -0.53
SMPD4-213ENST00000454468 MAGEA8P43361 318 aa11.71□□□□□ -0.53
SMPD4-213ENST00000454468 ACVR1Q04771 509 aa11.71□□□□□ -0.53
SMPD4-213ENST00000454468 SIM2Q14190 667 aaPredicted RBP11.71□□□□□ -0.53
SMPD4-213ENST00000454468 HMBOX1Q6NT76 420 aa11.71□□□□□ -0.53
SMPD4-213ENST00000454468 KLHDC10Q6PID8 442 aa11.71□□□□□ -0.53
SMPD4-213ENST00000454468 SBSNQ6UWP8 590 aa11.71□□□□□ -0.53
SMPD4-213ENST00000454468 TPRG1Q6ZUI0 275 aa11.71□□□□□ -0.53
SMPD4-213ENST00000454468 CCDC149Q6ZUS6 474 aa11.71□□□□□ -0.53
SMPD4-213ENST00000454468 VRK3Q8IV63 474 aa11.71□□□□□ -0.53
SMPD4-213ENST00000454468 CFAP206Q8IYR0 622 aa11.71□□□□□ -0.53
SMPD4-213ENST00000454468 PEX13Q92968 403 aa11.71□□□□□ -0.53
SMPD4-213ENST00000454468 THAP11Q96EK4 314 aa11.71□□□□□ -0.53
SMPD4-213ENST00000454468 FOPNLQ96NB1 174 aa11.71□□□□□ -0.53
SMPD4-213ENST00000454468 ZNF382Q96SR6 550 aa11.71□□□□□ -0.53
SMPD4-213ENST00000454468 CD244Q9BZW8 370 aa11.71□□□□□ -0.53
SMPD4-213ENST00000454468 OSGEPL1Q9H4B0 414 aa11.71□□□□□ -0.53
SMPD4-213ENST00000454468 DYRK4Q9NR20 520 aa11.71□□□□□ -0.53
SMPD4-213ENST00000454468 GALNT8Q9NY28 637 aa11.71□□□□□ -0.53
SMPD4-213ENST00000454468 ACTR3BQ9P1U1 418 aa11.71□□□□□ -0.53
SMPD4-213ENST00000454468 KIF17Q9P2E2 1029 aa11.71□□□□□ -0.53
SMPD4-213ENST00000454468 RANBP2P49792 3224 aaKnown RBP11.71□□□□□ -0.53
SMPD4-213ENST00000454468 MYO16Q9Y6X6 1858 aa11.71□□□□□ -0.53
SMPD4-213ENST00000454468 MGAT4DA6NG13 374 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 hCG_2039718K7EN88 272 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 ABLIM3O94929 683 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 POP4O95707 220 aaKnown RBP11.71□□□□□ -0.54
SMPD4-213ENST00000454468 PGRP06401 933 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 CCR7P32248 378 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 MAGEA10P43363 369 aaPredicted RBP11.71□□□□□ -0.54
SMPD4-213ENST00000454468 BDKRB1P46663 353 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 RPS9P46781 194 aaKnown RBP11.71□□□□□ -0.54
SMPD4-213ENST00000454468 CCT8P50990 548 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 LSM3P62310 102 aaKnown RBP11.71□□□□□ -0.54
SMPD4-213ENST00000454468 POLR2LP62875 67 aaKnown RBP11.71□□□□□ -0.54
SMPD4-213ENST00000454468 PIGFQ07326 219 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 GALNT1Q10472 559 aaPredicted RBP11.71□□□□□ -0.54
SMPD4-213ENST00000454468 TRAP1Q12931 704 aaKnown RBP11.71□□□□□ -0.54
SMPD4-213ENST00000454468 DYNC1I2Q13409 638 aaKnown RBP11.71□□□□□ -0.54
SMPD4-213ENST00000454468 FNDC3BQ53EP0 1204 aaKnown RBP11.71□□□□□ -0.54
SMPD4-213ENST00000454468 CARD16Q5EG05 197 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 RAET1GQ6H3X3 334 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 GPR180Q86V85 440 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 TRPV3Q8NET8 790 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 ZFP28Q8NHY6 868 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 TMEM125Q96AQ2 219 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 AP2M1Q96CW1 435 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 DGCR14Q96DF8 476 aaKnown RBP11.71□□□□□ -0.54
SMPD4-213ENST00000454468 NUSAP1Q9BXS6 441 aaKnown RBP11.71□□□□□ -0.54
SMPD4-213ENST00000454468 EMILIN2Q9BXX0 1053 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 LRRC3Q9BY71 257 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 POPDC3Q9HBV1 291 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 MBD1Q9UIS9 605 aaPredicted RBP11.71□□□□□ -0.54
SMPD4-213ENST00000454468 OR7A17O14581 309 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 MYO1DO94832 1006 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 PDYNP01213 254 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 CYP4F2P78329 520 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 IL5RAQ01344 420 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 MERTKQ12866 999 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 SLC14A2Q15849 920 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 ENPP6Q6UWR7 440 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 TMPRSS11BQ86T26 416 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 RAVER1Q8IY67 606 aaKnown RBP11.71□□□□□ -0.54
SMPD4-213ENST00000454468 BPIFB6Q8NFQ5 453 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 RIBC2Q9H4K1 309 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 LTB4R2Q9NPC1 389 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 TDP1Q9NUW8 608 aa11.71□□□□□ -0.54
SMPD4-213ENST00000454468 UNC80Q8N2C7 3258 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 STATHP02808 62 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 IMPDH2P12268 514 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 VIPR2P41587 438 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 NR1H2P55055 460 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 ERVFC1P60507 584 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 SULT1C3Q6IMI6 304 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 TMEM220Q6QAJ8 160 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 SUSD1Q6UWL2 747 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 TMEM150AQ86TG1 271 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 OSCP1Q8WVF1 389 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 KLK6Q92876 244 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 ITCHQ96J02 903 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms