RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 ROBO3Q96MS0 1386 aa9.77□□□□□ -0.85
CLTCL1-202ENST00000427926 HEPACAM2A8MVW5 462 aa9.77□□□□□ -0.85
CLTCL1-202ENST00000427926 CDC40O60508 579 aaKnown RBP eCLIP9.77□□□□□ -0.85
CLTCL1-202ENST00000427926 POP7O75817 140 aaKnown RBP9.77□□□□□ -0.85
CLTCL1-202ENST00000427926 CSNK2A2P19784 350 aaPredicted RBP9.77□□□□□ -0.85
CLTCL1-202ENST00000427926 MMP8P22894 467 aa9.77□□□□□ -0.85
CLTCL1-202ENST00000427926 ARCN1P48444 511 aaKnown RBP9.77□□□□□ -0.85
CLTCL1-202ENST00000427926 RPS21P63220 83 aaKnown RBP9.77□□□□□ -0.85
CLTCL1-202ENST00000427926 GBE1Q04446 702 aa9.77□□□□□ -0.85
CLTCL1-202ENST00000427926 GPR17Q13304 367 aa9.77□□□□□ -0.85
CLTCL1-202ENST00000427926 PUM1Q14671 1186 aaKnown RBP eCLIP9.77□□□□□ -0.85
CLTCL1-202ENST00000427926 ZNF662Q6ZS27 426 aa9.77□□□□□ -0.85
CLTCL1-202ENST00000427926 CPNE9Q8IYJ1 553 aa9.77□□□□□ -0.85
CLTCL1-202ENST00000427926 OR6N1Q8NGY5 312 aa9.77□□□□□ -0.85
CLTCL1-202ENST00000427926 STK32AQ8WU08 396 aa9.77□□□□□ -0.85
CLTCL1-202ENST00000427926 FAM3CQ92520 227 aa9.77□□□□□ -0.85
CLTCL1-202ENST00000427926 MMADHCQ9H3L0 296 aaPredicted RBP9.77□□□□□ -0.85
CLTCL1-202ENST00000427926 Q9N2J8 555 aa9.77□□□□□ -0.85
CLTCL1-202ENST00000427926 CRNNQ9UBG3 495 aaPredicted RBP9.77□□□□□ -0.85
CLTCL1-202ENST00000427926 CPSF4LA6NMK7 179 aaKnown RBP9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 ZNF20P17024 532 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 ENPEPQ07075 957 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 MRPL49Q13405 166 aaKnown RBP9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 ZIK1Q3SY52 487 aaPredicted RBP9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 DCST1Q5T197 706 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 LRRC55Q6ZSA7 311 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 SMPDL3AQ92484 453 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 RGMAQ96B86 450 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 ZNF599Q96NL3 588 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 USB1Q9BQ65 265 aaKnown RBP9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 ZDHHC3Q9NYG2 299 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 RUVBL1Q9Y265 456 aaKnown RBP9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 CIB4A0PJX0 185 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 NPIPA5E9PKD4 350 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 ACOT7O00154 380 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 CA3P07451 260 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 JUNDP17535 347 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 FAUP35544 74 aaKnown RBP9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 GABRB2P47870 512 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 CACNA2D1P54289 1103 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 ZNF844Q08AG5 666 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 EPYCQ99645 322 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 NPIPA1Q9UND3 350 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 TMEM98Q9Y2Y6 226 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 OAS3Q9Y6K5 1087 aaKnown RBP9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 CHST10O43529 356 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 PPP1R11O60927 126 aaPredicted RBP9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 DLDP09622 509 aaKnown RBP9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 HAPLN1P10915 354 aaPredicted RBP9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 TPSB2P20231 275 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 HSD11B1P28845 292 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 EPHA3P29320 983 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 GRIA2P42262 883 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 CTSKP43235 329 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 CCNHP51946 323 aaPredicted RBP9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 PLP2Q04941 152 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 COL9A3Q14050 684 aaPredicted RBP9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 TPSAB1Q15661 275 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 EMC10Q5UCC4 262 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 C22orf39Q6P5X5 142 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 TUBA3EQ6PEY2 450 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 FAM92BQ6ZTR7 304 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 PYROXD2Q8N2H3 581 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 TSEN2Q8NCE0 465 aaKnown RBP9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 ATXN2LQ8WWM7 1075 aaKnown RBP9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 AP3S1Q92572 193 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 NARS2Q96I59 477 aaKnown RBP9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 DCBLD2Q96PD2 775 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 TDRD1Q9BXT4 1180 aaKnown RBP9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 FZD8Q9H461 694 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 GDAP2Q9NXN4 497 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 TAC3Q9UHF0 121 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 MAGEL2Q9UJ55 1249 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 PRORSD1PA6NEY8 169 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 PLIN3O60664 434 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 MTX2O75431 263 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 ATP6V1G2O95670 118 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 SNHG28P0DPA3 235 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 COX4I1P13073 169 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 HOXB6P17509 224 aaKnown RBP9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 RAB28P51157 221 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 GALK1P51570 392 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 CSTF1Q05048 431 aaKnown RBP9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 CHAF1BQ13112 559 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 ZNF311Q5JNZ3 666 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 NIPAL1Q6NVV3 410 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 C10orf107Q8IVU9 208 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 C11orf65Q8NCR3 313 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 TRIB2Q92519 343 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 EZH1Q92800 747 aaPredicted RBP9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 DEFB126Q9BYW3 111 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 SEC61A2Q9H9S3 476 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 HRASLS2Q9NWW9 162 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 SSR3Q9UNL2 185 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 RABL2BQ9UNT1 228 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 EFR3BQ9Y2G0 817 aa9.76□□□□□ -0.85
CLTCL1-202ENST00000427926 FAM237BA0A1B0GVD1 139 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 SAP18O00422 153 aaKnown RBP9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 TP73O15350 636 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms