RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 OR2AK2Q8NG84 335 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 OR6T1Q8NGN1 323 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 OR10G7Q8NGN6 311 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 OR2W6PQ8NHA6 318 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 FAM110DQ8TAY7 271 aaPredicted RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 SPPL2AQ8TCT8 520 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 SLC22A17Q8WUG5 538 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 GATAD1Q8WUU5 269 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 PROX1Q92786 737 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 ATOH1Q92858 354 aaPredicted RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 SPSB4Q96A44 273 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 SLC22A18Q96BI1 424 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 NXPE2Q96DL1 559 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 CNRIP1Q96F85 164 aaPredicted RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 FAR2Q96K12 515 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 ZSCAN31Q96LW9 406 aaPredicted RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 RNF145Q96MT1 663 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 SORT1Q99523 831 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 DOK1Q99704 481 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 HNRNPABQ99729 332 aaKnown RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 NRTNQ99748 197 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 FEM1AQ9BSK4 669 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 HAUS8Q9BT25 410 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 FAM167BQ9BTA0 163 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 CCDC28BQ9BUN5 200 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 PLA2G2FQ9BZM2 168 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 CCDC8Q9H0W5 538 aaPredicted RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 SEMA6AQ9H2E6 1030 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 ATP13A3Q9H7F0 1226 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 MTHFD2LQ9H903 347 aaPredicted RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 ATP6V0A4Q9HBG4 840 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 TRPC7Q9HCX4 862 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 Q9N2J8 555 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 SH2D2AQ9NP31 389 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 EMC7Q9NPA0 242 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 KCNK9Q9NPC2 374 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 XPNPEP3Q9NQH7 507 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 G6PC2Q9NQR9 355 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 CHST12Q9NRB3 414 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 ST7Q9NRC1 585 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF277Q9NRM2 450 aaPredicted RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 METTL5Q9NRN9 209 aaKnown RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 SLC6A13Q9NSD5 602 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 LMBRD1Q9NUN5 540 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 SPATS2LQ9NUQ6 558 aaKnown RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 SPTLC3Q9NUV7 552 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 FBXO28Q9NVF7 368 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 SMPD3Q9NY59 655 aaPredicted RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 PTTG2Q9NZH5 202 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 WDR35Q9P2L0 1181 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 RNF14Q9UBS8 474 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 ABCF2Q9UG63 623 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 LNPEPQ9UIQ6 1025 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 KLHL21Q9UJP4 597 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 LEF1Q9UJU2 399 aaPredicted RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 IKZF2Q9UKS7 526 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 ITGA11Q9UKX5 1188 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 CA14Q9ULX7 337 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 SLC7A7Q9UM01 511 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 CAPN11Q9UMQ6 739 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 DUSP12Q9UNI6 340 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 PRG3Q9Y2Y8 225 aaPredicted RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 UBE2J1Q9Y385 318 aaPredicted RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 PKP3Q9Y446 797 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 PCDHA3Q9Y5H8 950 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 PCDHA1Q9Y5I3 950 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 OR51B4Q9Y5P0 310 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 GPR45Q9Y5Y3 372 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 CACNG2Q9Y698 323 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 CDC42BPBQ9Y5S2 1711 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 SF3B1O75533 1304 aaKnown RBP eCLIP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 MED13Q9UHV7 2174 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 IGLV3-12A0A075B6K2 115 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 PPIAL4EA0A075B759 164 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 CYP3A7-CYP3A51PA0A087WV96 503 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 A0A096LNJ9 63 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 PPIAL4CA0A0B4J2A2 164 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 IGHV3-35A0A0C4DH35 117 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 GXYLT2A0PJZ3 443 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 ANO9A1A5B4 782 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF320A2RRD8 509 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 FAM149AA5PLN7 773 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 NKX2-6A6NCS4 301 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 C5orf60A6NFR6 353 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 CCDC154A6NI56 674 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 RPL37AP8A6NKH3 93 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 C15orf62A8K5M9 175 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 HEPACAM2A8MVW5 462 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 ARHGEF33A8MVX0 844 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 C10orf142B7Z368 130 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 PPIAL4DF5H284 164 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 G3V2L1 256 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 H0YL77 283 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 C3orf84H3BNL1 204 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 STX16-NPEPL1H3BU86 382 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 DNASE2O00115 360 aaPredicted RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 PLD2O14939 933 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 SYN3O14994 580 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 WDR46O15213 610 aaKnown RBP-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms