RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 KATNA1O75449 491 aa16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 NTRK1P04629 796 aa16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 RPLP2P05387 115 aaKnown RBP16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 GGT1P19440 569 aa16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 LPOP22079 712 aaPredicted RBP16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 TRPC1P48995 793 aa16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 LETMD1Q6P1Q0 360 aa16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 DLEU7Q6UYE1 221 aa16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 P2RY8Q86VZ1 359 aa16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 CNIH3Q8TBE1 160 aa16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 DYNC2LI1Q8TCX1 351 aa16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 PHF10Q8WUB8 498 aaKnown RBP16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 FAM193BQ96PV7 902 aaPredicted RBP16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 MAGEH1Q9H213 219 aa16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 CPNE5Q9HCH3 593 aa16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 C3orf18Q9UK00 162 aa16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 G6PDP11413 515 aa16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 PRKACGP22612 351 aa16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 HTR6P50406 440 aa16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 NKX2-5P52952 324 aaPredicted RBP16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 PPP5CP53041 499 aa16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 ACOX1Q15067 660 aa16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 IL27RAQ6UWB1 636 aa16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 GET4Q7L5D6 327 aaPredicted RBP16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 ZFAND4Q86XD8 727 aa16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 RHOXF1Q8NHV9 184 aa16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 METTL6Q8TCB7 284 aa16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 MCOLN3Q8TDD5 553 aa16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 FRS2Q8WU20 508 aa16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 ABCB10Q9NRK6 738 aa16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 USE1Q9NZ43 259 aa16.28■□□□□ 0.2
PCDHA1-201ENST00000378133 E5RI56 91 aa16.27■□□□□ 0.2
PCDHA1-201ENST00000378133 GSTA4O15217 222 aa16.27■□□□□ 0.2
PCDHA1-201ENST00000378133 INPPL1O15357 1258 aa16.27■□□□□ 0.2
PCDHA1-201ENST00000378133 CAPN1P07384 714 aa16.27■□□□□ 0.2
PCDHA1-201ENST00000378133 CCDC159P0C7I6 412 aa16.27■□□□□ 0.2
PCDHA1-201ENST00000378133 CD40LGP29965 261 aa16.27■□□□□ 0.2
PCDHA1-201ENST00000378133 GRK3P35626 688 aa16.27■□□□□ 0.2
PCDHA1-201ENST00000378133 MAP2K4P45985 399 aa16.27■□□□□ 0.2
PCDHA1-201ENST00000378133 DGKQP52824 942 aa16.27■□□□□ 0.2
PCDHA1-201ENST00000378133 NCS1P62166 190 aa16.27■□□□□ 0.2
PCDHA1-201ENST00000378133 FPGSQ05932 587 aa16.27■□□□□ 0.2
PCDHA1-201ENST00000378133 CDC20Q12834 499 aa16.27■□□□□ 0.2
PCDHA1-201ENST00000378133 CDK5R2Q13319 367 aa16.27■□□□□ 0.2
PCDHA1-201ENST00000378133 CATSPEREQ5SY80 951 aa16.27■□□□□ 0.2
PCDHA1-201ENST00000378133 ZNF691Q5VV52 312 aa16.27■□□□□ 0.2
PCDHA1-201ENST00000378133 ABI1Q8IZP0 508 aa16.27■□□□□ 0.2
PCDHA1-201ENST00000378133 SVOPLQ8N434 492 aa16.27■□□□□ 0.2
PCDHA1-201ENST00000378133 Q8N9G6 341 aaPredicted RBP16.27■□□□□ 0.2
PCDHA1-201ENST00000378133 GPR62Q9BZJ7 368 aa16.27■□□□□ 0.2
PCDHA1-201ENST00000378133 SMPD4Q9NXE4 827 aa16.27■□□□□ 0.2
PCDHA1-201ENST00000378133 ERVK-18Q9QC07 812 aa16.27■□□□□ 0.2
PCDHA1-201ENST00000378133 LIMD1Q9UGP4 676 aa16.27■□□□□ 0.2
PCDHA1-201ENST00000378133 INTS6Q9UL03 887 aaKnown RBP16.27■□□□□ 0.2
PCDHA1-201ENST00000378133 RABL2BQ9UNT1 228 aa16.27■□□□□ 0.2
PCDHA1-201ENST00000378133 PCDHGB1Q9Y5G3 927 aa16.27■□□□□ 0.2
PCDHA1-201ENST00000378133 VWA8A3KMH1 1905 aa16.27■□□□□ 0.2
PCDHA1-201ENST00000378133 TTC34A8MYJ7 566 aa16.27■□□□□ 0.19
PCDHA1-201ENST00000378133 NUAK1O60285 661 aa16.27■□□□□ 0.19
PCDHA1-201ENST00000378133 TSPAN3O60637 253 aa16.27■□□□□ 0.19
PCDHA1-201ENST00000378133 ADAMTS4O75173 837 aa16.27■□□□□ 0.19
PCDHA1-201ENST00000378133 GSNP06396 782 aa16.27■□□□□ 0.19
PCDHA1-201ENST00000378133 ALDH7A1P49419 539 aaKnown RBP16.27■□□□□ 0.19
PCDHA1-201ENST00000378133 IL5RAQ01344 420 aa16.27■□□□□ 0.19
PCDHA1-201ENST00000378133 DUSP4Q13115 394 aa16.27■□□□□ 0.19
PCDHA1-201ENST00000378133 DGCR6Q14129 220 aa16.27■□□□□ 0.19
PCDHA1-201ENST00000378133 RSPO2Q6UXX9 243 aaPredicted RBP16.27■□□□□ 0.19
PCDHA1-201ENST00000378133 RNF19BQ6ZMZ0 732 aa16.27■□□□□ 0.19
PCDHA1-201ENST00000378133 DPP10Q8N608 796 aa16.27■□□□□ 0.19
PCDHA1-201ENST00000378133 HHIPL1Q96JK4 782 aa16.27■□□□□ 0.19
PCDHA1-201ENST00000378133 HOXD1Q9GZZ0 328 aa16.27■□□□□ 0.19
PCDHA1-201ENST00000378133 SP140LQ9H930 580 aa16.27■□□□□ 0.19
PCDHA1-201ENST00000378133 TMA7Q9Y2S6 64 aaKnown RBP16.27■□□□□ 0.19
PCDHA1-201ENST00000378133 TMEM189-UBE2V1I3L0A0 370 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 SNPHO15079 494 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 ACSL4O60488 711 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 AOC2O75106 756 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 CR2P20023 1033 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 TTPAP49638 278 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 IFITM2Q01629 132 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 NKG7Q16617 165 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 CCDC81Q6ZN84 652 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 SLC24A5Q71RS6 500 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 TAS2R42Q7RTR8 314 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 NECAB2Q7Z6G3 386 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 YIPF6Q96EC8 236 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 TXNDC15Q96J42 360 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 ZNF382Q96SR6 550 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 ARHGAP39Q9C0H5 1083 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 DSN1Q9H410 356 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 ACTL8Q9H568 366 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 ADGRE2Q9UHX3 823 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 UTS2RQ9UKP6 389 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 N6AMT1Q9Y5N5 214 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 RAI2Q9Y5P3 530 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 CHD5Q8TDI0 1954 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 MTMR11A4FU01 709 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 ANKRD66B4E2M5 251 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 CBX4O00257 560 aa16.26■□□□□ 0.19
PCDHA1-201ENST00000378133 STX7O15400 261 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms