RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 TESMINQ9Y4I5 508 aa13.37□□□□□ -0.27
C9orf47-203ENST00000375851 MYH8P13535 1937 aa13.37□□□□□ -0.27
C9orf47-203ENST00000375851 STX16-NPEPL1H3BU86 382 aa13.37□□□□□ -0.27
C9orf47-203ENST00000375851 PCDH7O60245 1069 aa13.37□□□□□ -0.27
C9orf47-203ENST00000375851 CHRNA1P02708 482 aa13.37□□□□□ -0.27
C9orf47-203ENST00000375851 ACP5P13686 325 aa13.37□□□□□ -0.27
C9orf47-203ENST00000375851 DDX6P26196 483 aaKnown RBP eCLIP13.37□□□□□ -0.27
C9orf47-203ENST00000375851 ATP12AP54707 1039 aa13.37□□□□□ -0.27
C9orf47-203ENST00000375851 CDH12P55289 794 aa13.37□□□□□ -0.27
C9orf47-203ENST00000375851 SLC9A5Q14940 896 aa13.37□□□□□ -0.27
C9orf47-203ENST00000375851 DCST1Q5T197 706 aa13.37□□□□□ -0.27
C9orf47-203ENST00000375851 FRG2Q64ET8 278 aa13.37□□□□□ -0.27
C9orf47-203ENST00000375851 MZT2AQ6P582 158 aa13.37□□□□□ -0.27
C9orf47-203ENST00000375851 C22orf39Q6P5X5 142 aa13.37□□□□□ -0.27
C9orf47-203ENST00000375851 RPS27LQ71UM5 84 aaKnown RBP13.37□□□□□ -0.27
C9orf47-203ENST00000375851 CELF5Q8N6W0 485 aaKnown RBP13.37□□□□□ -0.27
C9orf47-203ENST00000375851 ZCCHC10Q8TBK6 192 aa13.37□□□□□ -0.27
C9orf47-203ENST00000375851 FRG2BQ96QU4 278 aa13.37□□□□□ -0.27
C9orf47-203ENST00000375851 CCDC88AQ3V6T2 1871 aa13.37□□□□□ -0.27
C9orf47-203ENST00000375851 RGS10O43665 173 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 FADS2O95864 444 aaKnown RBP13.36□□□□□ -0.27
C9orf47-203ENST00000375851 SERPINA1P01009 418 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 ATP1B2P14415 290 aaPredicted RBP13.36□□□□□ -0.27
C9orf47-203ENST00000375851 AOC1P19801 751 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 C1QTNF8P60827 252 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 OLR1P78380 273 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 CREB5Q02930 508 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 BLMHQ13867 455 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 SLBPQ14493 270 aaKnown RBP eCLIP13.36□□□□□ -0.27
C9orf47-203ENST00000375851 TAF13Q15543 124 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 TEAD2Q15562 447 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 EPGNQ6UW88 154 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 FAM220AQ7Z4H9 259 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 GRASPQ7Z6J2 395 aaPredicted RBP13.36□□□□□ -0.27
C9orf47-203ENST00000375851 IZUMO1Q8IYV9 350 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 ZNF248Q8NDW4 579 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 PSMA8Q8TAA3 256 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 DNASE1L2Q92874 299 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 LRRC58Q96CX6 371 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 HERPUD2Q9BSE4 406 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 EBF3Q9H4W6 596 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 WDR26Q9H7D7 661 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 SIRPGQ9P1W8 387 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.36□□□□□ -0.27
C9orf47-203ENST00000375851 AQP12BA6NM10 295 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 SAP18O00422 153 aaKnown RBP13.36□□□□□ -0.27
C9orf47-203ENST00000375851 TP73O15350 636 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 ERN1O75460 977 aaKnown RBP13.36□□□□□ -0.27
C9orf47-203ENST00000375851 SLC10A3P09131 477 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 MTHFD1P11586 935 aaKnown RBP13.36□□□□□ -0.27
C9orf47-203ENST00000375851 CKMT2P17540 419 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 SLC7A1P30825 629 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 GGT5P36269 586 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 ACTR1BP42025 376 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 DGKQP52824 942 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 ACTR1AP61163 376 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 STXBP1P61764 594 aaKnown RBP13.36□□□□□ -0.27
C9orf47-203ENST00000375851 PRR5P85299 388 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 LGALS3BPQ08380 585 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 NDUFA9Q16795 377 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.36□□□□□ -0.27
C9orf47-203ENST00000375851 AQP12AQ8IXF9 295 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 TMEM130Q8N3G9 435 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 OR9I1Q8NGQ6 314 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 SLC38A4Q969I6 547 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 PSKH2Q96QS6 385 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 DERL2Q9GZP9 239 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 SRMSQ9H3Y6 488 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 UPK3BL1B0FP48 263 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 UPK3BL2E5RIL1 263 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 RAP2AP10114 183 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 MYCLP1P12525 358 aaPredicted RBP13.36□□□□□ -0.27
C9orf47-203ENST00000375851 FSHRP23945 695 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 GDI1P31150 447 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 VIPR1P32241 457 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 ZNF252P-AS1Q0IIN9 211 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 GRSF1Q12849 480 aaKnown RBP eCLIP13.36□□□□□ -0.27
C9orf47-203ENST00000375851 TRAP1Q12931 704 aaKnown RBP13.36□□□□□ -0.27
C9orf47-203ENST00000375851 SIX1Q15475 284 aaPredicted RBP13.36□□□□□ -0.27
C9orf47-203ENST00000375851 SNAPC1Q16533 368 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 DNAJB8Q8NHS0 232 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 CANT1Q8WVQ1 401 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 SMG9Q9H0W8 520 aaKnown RBP13.36□□□□□ -0.27
C9orf47-203ENST00000375851 NSUN3Q9H649 340 aaKnown RBP13.36□□□□□ -0.27
C9orf47-203ENST00000375851 MRM3Q9HC36 420 aaKnown RBP13.36□□□□□ -0.27
C9orf47-203ENST00000375851 ZDHHC4Q9NPG8 344 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 A0A0G2JN53 185 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 MATN2O00339 956 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 TMCC2O75069 709 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 TSC22D2O75157 780 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 CNMDO75829 334 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 TGFB1P01137 390 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 SAGP10523 405 aaPredicted RBP13.36□□□□□ -0.27
C9orf47-203ENST00000375851 EIF2B2P49770 351 aaKnown RBP13.36□□□□□ -0.27
C9orf47-203ENST00000375851 RPL26P61254 145 aaKnown RBP13.36□□□□□ -0.27
C9orf47-203ENST00000375851 ALG11Q2TAA5 492 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 PLEKHG6Q3KR16 790 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 POC5Q8NA72 575 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 ZMIZ2Q8NF64 920 aa13.36□□□□□ -0.27
C9orf47-203ENST00000375851 OR4F6Q8NGB9 312 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms