RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 SGO1Q5FBB7 561 aa11.83□□□□□ -0.52
HMGCL-202ENST00000374487 LCN8Q6JVE9 175 aa11.83□□□□□ -0.52
HMGCL-202ENST00000374487 NANOGP8Q6NSW7 305 aa11.83□□□□□ -0.52
HMGCL-202ENST00000374487 GDPD4Q6W3E5 623 aa11.83□□□□□ -0.52
HMGCL-202ENST00000374487 RFLNAQ6ZTI6 216 aa11.83□□□□□ -0.52
HMGCL-202ENST00000374487 DET1Q7L5Y6 550 aa11.83□□□□□ -0.52
HMGCL-202ENST00000374487 ZNF557Q8N988 423 aaPredicted RBP11.83□□□□□ -0.52
HMGCL-202ENST00000374487 CHST14Q8NCH0 376 aa11.83□□□□□ -0.52
HMGCL-202ENST00000374487 ASB16Q96NS5 453 aa11.83□□□□□ -0.52
HMGCL-202ENST00000374487 TMEM79Q9BSE2 394 aa11.83□□□□□ -0.52
HMGCL-202ENST00000374487 SPATA16Q9BXB7 569 aa11.83□□□□□ -0.52
HMGCL-202ENST00000374487 LINC00597Q9H2U6 94 aa11.83□□□□□ -0.52
HMGCL-202ENST00000374487 NANOGQ9H9S0 305 aa11.83□□□□□ -0.52
HMGCL-202ENST00000374487 SPHK2Q9NRA0 654 aa11.83□□□□□ -0.52
HMGCL-202ENST00000374487 SLAMF8Q9P0V8 285 aa11.83□□□□□ -0.52
HMGCL-202ENST00000374487 B4GALT6Q9UBX8 382 aa11.83□□□□□ -0.52
HMGCL-202ENST00000374487 KLQ9UEF7 1012 aa11.83□□□□□ -0.52
HMGCL-202ENST00000374487 CD84Q9UIB8 345 aa11.83□□□□□ -0.52
HMGCL-202ENST00000374487 EIF3LQ9Y262 564 aaKnown RBP11.83□□□□□ -0.52
HMGCL-202ENST00000374487 POLR3HQ9Y535 204 aaPredicted RBP11.83□□□□□ -0.52
HMGCL-202ENST00000374487 OBSL1O75147 1896 aa11.83□□□□□ -0.52
HMGCL-202ENST00000374487 H0YJX3 145 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 SLC28A1O00337 649 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 ZNF197O14709 1029 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 INPP4BO15327 924 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 EBLN1P0CF75 366 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 CCR7P32248 378 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 SOX11P35716 441 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 SPINT3P49223 89 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 RPL38P63173 70 aaKnown RBP11.82□□□□□ -0.52
HMGCL-202ENST00000374487 CDKL1Q00532 357 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 AASDHQ4L235 1098 aaPredicted RBP11.82□□□□□ -0.52
HMGCL-202ENST00000374487 IRAK1BP1Q5VVH5 260 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 METTL2BQ6P1Q9 378 aaKnown RBP11.82□□□□□ -0.52
HMGCL-202ENST00000374487 SLC2A7Q6PXP3 512 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 MBOAT1Q6ZNC8 495 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 ZBTB49Q6ZSB9 765 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 HID1Q8IV36 788 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 KIAA2013Q8IYS2 634 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 GOLM1Q8NBJ4 401 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 VOPP1Q96AW1 172 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 ZFYVE19Q96K21 471 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 TMEM74Q96NL1 305 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 ZBTB18Q99592 522 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 MUC13Q9H3R2 512 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 UBAP1Q9NZ09 502 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 PKD2L2Q9NZM6 624 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 KLHL42Q9P2K6 505 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 ZNF490Q9ULM2 529 aaPredicted RBP11.82□□□□□ -0.52
HMGCL-202ENST00000374487 RNF11Q9Y3C5 154 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 IFRD1O00458 451 aaPredicted RBP11.82□□□□□ -0.52
HMGCL-202ENST00000374487 AP1G1O43747 822 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 C1SP09871 688 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 HIST1H2AGP0C0S8 130 aaPredicted RBP11.82□□□□□ -0.52
HMGCL-202ENST00000374487 POLR2EP19388 210 aaKnown RBP11.82□□□□□ -0.52
HMGCL-202ENST00000374487 HIST1H2ADP20671 130 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 NNMTP40261 264 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 EEFSECP57772 596 aaKnown RBP11.82□□□□□ -0.52
HMGCL-202ENST00000374487 B4GALNT1Q00973 533 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 MAD2L1Q13257 205 aaPredicted RBP11.82□□□□□ -0.52
HMGCL-202ENST00000374487 TDGQ13569 410 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 CYP51A1Q16850 503 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 VITQ6UXI7 678 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 UBE2R2Q712K3 238 aaPredicted RBP11.82□□□□□ -0.52
HMGCL-202ENST00000374487 ERMP1Q7Z2K6 904 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 NAT16Q8N8M0 369 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 UBTD2Q8WUN7 234 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 EDAQ92838 391 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 HIST1H2AHQ96KK5 128 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 HIST1H2AJQ99878 128 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 H2AFJQ9BTM1 129 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 NTMT1Q9BV86 223 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 PIF1Q9H611 641 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 FARSBQ9NSD9 589 aaKnown RBP11.82□□□□□ -0.52
HMGCL-202ENST00000374487 INTS7Q9NVH2 962 aaKnown RBP11.82□□□□□ -0.52
HMGCL-202ENST00000374487 TBC1D14Q9P2M4 693 aa11.82□□□□□ -0.52
HMGCL-202ENST00000374487 TPST1O60507 370 aa11.81□□□□□ -0.52
HMGCL-202ENST00000374487 SEC22BO75396 215 aa11.81□□□□□ -0.52
HMGCL-202ENST00000374487 TNFAIP8O95379 198 aa11.81□□□□□ -0.52
HMGCL-202ENST00000374487 ENO2P09104 434 aaPredicted RBP11.81□□□□□ -0.52
HMGCL-202ENST00000374487 FAM58BPP0C7Q3 252 aa11.81□□□□□ -0.52
HMGCL-202ENST00000374487 MTHFD1P11586 935 aaKnown RBP11.81□□□□□ -0.52
HMGCL-202ENST00000374487 BMP2P12643 396 aa11.81□□□□□ -0.52
HMGCL-202ENST00000374487 ATP1B2P14415 290 aaPredicted RBP11.81□□□□□ -0.52
HMGCL-202ENST00000374487 NCK1P16333 377 aa11.81□□□□□ -0.52
HMGCL-202ENST00000374487 PSMC3P17980 439 aa11.81□□□□□ -0.52
HMGCL-202ENST00000374487 FASP25445 335 aa11.81□□□□□ -0.52
HMGCL-202ENST00000374487 GNPDA1P46926 289 aa11.81□□□□□ -0.52
HMGCL-202ENST00000374487 DMC1Q14565 340 aa11.81□□□□□ -0.52
HMGCL-202ENST00000374487 LIN52Q52LA3 116 aa11.81□□□□□ -0.52
HMGCL-202ENST00000374487 LY6G5CQ5SRR4 150 aa11.81□□□□□ -0.52
HMGCL-202ENST00000374487 CACHD1Q5VU97 1274 aa11.81□□□□□ -0.52
HMGCL-202ENST00000374487 FOXB2Q5VYV0 432 aa11.81□□□□□ -0.52
HMGCL-202ENST00000374487 HMBOX1Q6NT76 420 aa11.81□□□□□ -0.52
HMGCL-202ENST00000374487 BRAT1Q6PJG6 821 aa11.81□□□□□ -0.52
HMGCL-202ENST00000374487 ISLR2Q6UXK2 745 aa11.81□□□□□ -0.52
HMGCL-202ENST00000374487 HOMEZQ8IX15 550 aa11.81□□□□□ -0.52
HMGCL-202ENST00000374487 ANKFN1Q8N957 763 aa11.81□□□□□ -0.52
HMGCL-202ENST00000374487 OR2A12Q8NGT7 310 aa11.81□□□□□ -0.52
HMGCL-202ENST00000374487 ZNF597Q96LX8 424 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms