RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 OR2B3O76000 313 aa8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 MT-CYBP00156 380 aaPredicted RBP8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 CELA2AP08217 269 aa8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 RARAP10276 462 aa8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 VCLP18206 1134 aa8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 RNF144AP50876 292 aaPredicted RBP8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 ABCA4P78363 2273 aa8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 GALNT2Q10471 571 aa8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 BECN1Q14457 450 aa8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 FAAH2Q6GMR7 532 aa8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 ACAD10Q6JQN1 1059 aa8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 MTFR2Q6P444 385 aa8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 TMEM220Q6QAJ8 160 aa8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 DAAM2Q86T65 1068 aa8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 CHERPQ8IWX8 916 aaKnown RBP8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 ADGRF3Q8IZF5 1079 aa8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 FLVCR1-AS1Q8TAF5 88 aa8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 NSMCE1Q8WV22 266 aa8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 LMF1Q96S06 567 aa8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 FOXC2Q99958 501 aa8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 SLC7A5P2Q9GIP4 190 aa8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 EPS8L2Q9H6S3 715 aa8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 IL26Q9NPH9 171 aa8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 CCM2LQ9NUG4 571 aaPredicted RBP8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 TAB2Q9NYJ8 693 aa8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 CTSFQ9UBX1 484 aa8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 NDOR1Q9UHB4 597 aa8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 GOLGA6L4A6NEF3 574 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 TMCO5BA8MYB1 307 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 PES1O00541 588 aaKnown RBP8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 POLBP06746 335 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 HBQ1P09105 142 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 VSIG8P0DPA2 414 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 ZNF165P49910 485 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 SMSP52788 366 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 ARG2P78540 354 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 SLC10A2Q12908 348 aaPredicted RBP8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 ZBTB17Q13105 803 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 NKG7Q16617 165 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 LONRF1Q17RB8 773 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 SKOR2Q2VWA4 1001 aaPredicted RBP8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 OXLD1Q5BKU9 147 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 FNBP1LQ5T0N5 605 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 NCBP2-AS2Q69YL0 99 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 C3P1Q6ZMU1 363 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 Q6ZPB1 254 aaPredicted RBP8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 MICALCLQ6ZW33 695 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 DET1Q7L5Y6 550 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 CPNE8Q86YQ8 564 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 GDAP1Q8TB36 358 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 PROKR1Q8TCW9 393 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 ZFPM2Q8WW38 1151 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 C8orf44Q96CB5 159 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 TSGA13Q96PP4 275 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 C17orf62Q9BQA9 187 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 AP1M1Q9BXS5 423 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 CEP41Q9BYV8 373 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 TSPAN10Q9H1Z9 355 aaPredicted RBP8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 SRMSQ9H3Y6 488 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 SOX17Q9H6I2 414 aaPredicted RBP8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 ZNF160Q9HCG1 818 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 MAGEE1Q9HCI5 957 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 PTGFRNQ9P2B2 879 aa8.15□□□□□ -1.1
HMGB1P39-201ENST00000366304 C17orf113A0A1B0GUU1 675 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 KCNK1O00180 336 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 ZSCAN9O15535 394 aaPredicted RBP8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 KCNJ13O60928 360 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 RNF8O76064 485 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 SLCO2B1O94956 709 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 MED26O95402 600 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 WDPCPO95876 746 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 ONECUT2O95948 504 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 TPBGLP0DKB5 382 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 ESRRAP11474 423 aaPredicted RBP8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 CES1P23141 567 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 ARL4AP40617 200 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 ARSEP51690 589 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 ZNF135P52742 658 aaPredicted RBP8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 SLC25A11Q02978 314 aaKnown RBP8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 GBE1Q04446 702 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 TFF3Q07654 80 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 PTPRCAPQ14761 206 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 INAQ16352 499 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 TUBB8Q3ZCM7 444 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 ZNF658BQ4V348 819 aaPredicted RBP8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 GPRC6AQ5T6X5 926 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 TMEM198Q66K66 360 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 OVCH1Q7RTY7 1134 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 FGD2Q7Z6J4 655 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 GPR135Q8IZ08 494 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 DNAJC22Q8N4W6 341 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 SIRT6Q8N6T7 355 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 C19orf47Q8N9M1 422 aaKnown RBP8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 PHC3Q8NDX5 983 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 BRIX1Q8TDN6 353 aaKnown RBP8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 LCN9Q8WX39 176 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 HAS2Q92819 552 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 TADA1Q96BN2 335 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 ARSGQ96EG1 525 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 DMRTA2Q96SC8 542 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms