RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 GPD2P43304 727 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 XKP51811 444 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 OR12D2P58182 307 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 MCCD1P59942 119 aaPredicted RBP15.77■□□□□ 0.11
COL18A1-203ENST00000359759 SYT16Q17RD7 645 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 IQCCQ4KMZ1 466 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 SLC22A16Q86VW1 577 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 RIOX2Q8IUF8 465 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 TOP6BLQ8N6T0 577 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 BPIFB1Q8TDL5 484 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 NXPE2Q96DL1 559 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 CYP2S1Q96SQ9 504 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 CCDC86Q9H6F5 360 aaKnown RBP15.77■□□□□ 0.11
COL18A1-203ENST00000359759 IL1RAPQ9NPH3 570 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 EI24O14681 340 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 RENP00797 406 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 UGT1A6P19224 532 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 UGT1A1P22309 533 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 UGT1A4P22310 534 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 PRDX6P30041 224 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 UGT1A3P35503 534 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 NCBP2P52298 156 aaKnown RBP eCLIP15.77■□□□□ 0.111e-6■■■■□ 20.9
COL18A1-203ENST00000359759 SLC3A1Q07837 685 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 KLHL22Q53GT1 634 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 ZNF598Q86UK7 904 aaKnown RBP15.77■□□□□ 0.11
COL18A1-203ENST00000359759 MON1AQ86VX9 555 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 ZNF280BQ86YH2 543 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 KLHL36Q8N4N3 616 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 PLD5Q8N7P1 536 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 OR5K1Q8NHB7 308 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 LPIN3Q9BQK8 851 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 TRMT61BQ9BVS5 477 aaKnown RBP15.77■□□□□ 0.11
COL18A1-203ENST00000359759 SLC17A6Q9P2U8 582 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 NOTOA8MTQ0 251 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 CSTF2P33240 577 aaKnown RBP eCLIP15.77■□□□□ 0.116e-9■■■□□ 14.7
COL18A1-203ENST00000359759 SCARB2Q14108 478 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 SYVN1Q86TM6 617 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 RASSF5Q8WWW0 418 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 BTN2A3PQ96KV6 586 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 DPEP3Q9H4B8 488 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 PTTG2Q9NZH5 202 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 PTCH2Q9Y6C5 1203 aa15.77■□□□□ 0.11
COL18A1-203ENST00000359759 PDLIM1O00151 329 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 CLDN4O14493 209 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 HOXB6P17509 224 aaKnown RBP15.76■□□□□ 0.11
COL18A1-203ENST00000359759 IDSP22304 550 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 SLC6A9P48067 706 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 KHKP50053 298 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 CLCN4P51793 760 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 HSDL1Q3SXM5 330 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 NUP54Q7Z3B4 507 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 SNX29P2Q8IUI4 249 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 RAB2BQ8WUD1 216 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 TIFAQ96CG3 184 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 FGFBP2Q9BYJ0 223 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 C1orf167Q5SNV9 1468 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 ELOA3DA6NLF2 546 aaPredicted RBP15.76■□□□□ 0.11
COL18A1-203ENST00000359759 AP2A1O95782 977 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 EPHX1P07099 455 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 GDI2P50395 445 aaKnown RBP15.76■□□□□ 0.11
COL18A1-203ENST00000359759 LIMK2P53671 638 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 CDH15P55291 814 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 ELOA3BQ3SY89 546 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 ZACNQ401N2 412 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 ZDHHC20Q5W0Z9 365 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 TRIM74Q86UV6 250 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 TRIM73Q86UV7 250 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 BEND7Q8N7W2 519 aaPredicted RBP15.76■□□□□ 0.11
COL18A1-203ENST00000359759 GALNT11Q8NCW6 608 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 ELOA3Q8NG57 546 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 GPR151Q8TDV0 419 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 ROPN1LQ96C74 230 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 ZNF510Q9Y2H8 683 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 C5orf60A6NFR6 353 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 RNF225M0QZC1 329 aaPredicted RBP15.76■□□□□ 0.11
COL18A1-203ENST00000359759 IFNA7P01567 189 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 HK1P19367 917 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 UQCRC1P31930 480 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 RPL19P84098 196 aaKnown RBP15.76■□□□□ 0.11
COL18A1-203ENST00000359759 XKR4Q5GH76 650 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 APOBEC3HQ6NTF7 200 aaKnown RBP15.76■□□□□ 0.11
COL18A1-203ENST00000359759 CATSPERGQ6ZRH7 1159 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 ZNF662Q6ZS27 426 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 OR5AK3PQ8NH89 298 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 KLK6Q92876 244 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 RBM18Q96H35 190 aaKnown RBP15.76■□□□□ 0.11
COL18A1-203ENST00000359759 POMPQ9Y244 141 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 PLEKHA6Q9Y2H5 1048 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 KERAO60938 352 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 MAT2AP31153 395 aaKnown RBP15.76■□□□□ 0.11
COL18A1-203ENST00000359759 GBX2P52951 348 aaPredicted RBP15.76■□□□□ 0.11
COL18A1-203ENST00000359759 NPTX1Q15818 432 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 UBXN11Q5T124 520 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 CYP2U1Q7Z449 544 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 MARCH9Q86YJ5 346 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 TMEM199Q8N511 208 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 FARSBQ9NSD9 589 aaKnown RBP15.76■□□□□ 0.11
COL18A1-203ENST00000359759 TLL2Q9Y6L7 1015 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 GPR89AB7ZAQ6 455 aa15.76■□□□□ 0.11
COL18A1-203ENST00000359759 GPR89BP0CG08 455 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms