RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 PUM1Q14671 1186 aaKnown RBP eCLIP5.45□□□□□ -1.54
PTPRD-202ENST00000356435 RFTN1Q14699 578 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-202ENST00000356435 RNASE12Q5GAN4 147 aaKnown RBP5.45□□□□□ -1.54
PTPRD-202ENST00000356435 TOR1AIP1Q5JTV8 583 aa5.45□□□□□ -1.54
PTPRD-202ENST00000356435 TRIM74Q86UV6 250 aa5.45□□□□□ -1.54
PTPRD-202ENST00000356435 TRIM73Q86UV7 250 aa5.45□□□□□ -1.54
PTPRD-202ENST00000356435 ARL14EPQ8N8R7 260 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-202ENST00000356435 DQX1Q8TE96 717 aaKnown RBP5.45□□□□□ -1.54
PTPRD-202ENST00000356435 C11orf16Q9NQ32 467 aa5.45□□□□□ -1.54
PTPRD-202ENST00000356435 ABCB8Q9NUT2 735 aa5.45□□□□□ -1.54
PTPRD-202ENST00000356435 PRPF19Q9UMS4 504 aaKnown RBP5.45□□□□□ -1.54
PTPRD-202ENST00000356435 WBP11Q9Y2W2 641 aaKnown RBP5.45□□□□□ -1.54
PTPRD-202ENST00000356435 DNMT3AQ9Y6K1 912 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-202ENST00000356435 A0A0J9YYE9 177 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 SLC30A4O14863 429 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 OR1I1O60431 355 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 LYPLA2O95372 231 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 ESR1P03372 595 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 PFKMP08237 780 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 PABPC4LP0CB38 370 aaKnown RBP5.44□□□□□ -1.54
PTPRD-202ENST00000356435 ADAM8P78325 824 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 CHIT1Q13231 466 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 IL18R1Q13478 541 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 ENPP2Q13822 863 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 DECR1Q16698 335 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 SATL1Q86VE3 508 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 CAMKVQ8NCB2 501 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 PROKR2Q8NFJ6 384 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 TWIST2Q8WVJ9 160 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 PMM1Q92871 262 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 CSPG4P5Q96PW8 444 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 PFDN2Q9UHV9 154 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 CLEC4AQ9UMR7 237 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 TCAF1Q9Y4C2 921 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 SPEF1Q9Y4P9 236 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 ZNF541Q9H0D2 1346 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 METTL21EPA6NDL7 271 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 DUXAA6NLW8 204 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 WNT9AO14904 365 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 CDC40O60508 579 aaKnown RBP eCLIP5.44□□□□□ -1.54
PTPRD-202ENST00000356435 PDYNP01213 254 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 CALCAP01258 141 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 CHRNA1P02708 482 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 TSPAN8P19075 237 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 CLCNKBP51801 687 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 PITPNAQ00169 270 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 SLC25A3Q00325 362 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 PRKCZQ05513 592 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 NFATC2Q13469 925 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 SLC25A25Q6KCM7 469 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 MBOAT1Q6ZNC8 495 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 SAPCD2Q86UD0 394 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 C10orf107Q8IVU9 208 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 SVOPLQ8N434 492 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 SCGB3A2Q96PL1 93 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 NUSAP1Q9BXS6 441 aaKnown RBP5.44□□□□□ -1.54
PTPRD-202ENST00000356435 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.44□□□□□ -1.54
PTPRD-202ENST00000356435 SLC25A51Q9H1U9 297 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 TLR9Q9NR96 1032 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 FER1L4A9Z1Z3 1794 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 KCNU1A8MYU2 1149 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 TP73O15350 636 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 PRPS2P11908 318 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 SMPD1P17405 629 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 EPHA3P29320 983 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 AQP1P29972 269 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 PTGER3P43115 390 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 ARCN1P48444 511 aaKnown RBP5.44□□□□□ -1.54
PTPRD-202ENST00000356435 CDKL1Q00532 357 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 SEMA5AQ13591 1074 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 UGCGQ16739 394 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 DPY19L1Q2PZI1 675 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 DUS1LQ6P1R4 473 aaKnown RBP5.44□□□□□ -1.54
PTPRD-202ENST00000356435 SMARCD3Q6STE5 483 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 HFE2Q6ZVN8 426 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 SLC26A9Q7LBE3 791 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 TRABD2AQ86V40 505 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 TMEM17Q86X19 198 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 SLITRK4Q8IW52 837 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 ZNF567Q8N184 647 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 OR2L8Q8NGY9 312 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 RCN3Q96D15 328 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 ITPKCQ96DU7 683 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 C11orf24Q96F05 449 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-202ENST00000356435 SIPA1Q96FS4 1042 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 MIPEPQ99797 713 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 PTPN18Q99952 460 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 ZSCAN5AQ9BUG6 496 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 NMUR1Q9HB89 426 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 TAS2R14Q9NYV8 317 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 MYO5BQ9ULV0 1848 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 OR14I1A6ND48 311 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 L7N2F9 121 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 KLF11O14901 512 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 IRAK2O43187 625 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 NME6O75414 186 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-202ENST00000356435 BANF1O75531 89 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 PBX3P40426 434 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 CEBPGP53567 150 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 VAMP2P63027 116 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms