RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 OLAHQ9NV23 265 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 TBX21Q9UL17 535 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 CDC14AQ9UNH5 594 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 SNX8Q9Y5X2 465 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 TCRBV3S1A0A5B6 114 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 MGAT4DA6NG13 374 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 ABLIM3O94929 683 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 WISP3O95389 354 aaPredicted RBP10.18□□□□□ -0.78
SMPD4-201ENST00000351288 C1QCP02747 245 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 POLR2JP52435 117 aaKnown RBP10.18□□□□□ -0.78
SMPD4-201ENST00000351288 PIGFQ07326 219 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 GRIN2CQ14957 1233 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 ABRAXAS2Q15018 415 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 SLC14A2Q15849 920 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 C6orf136Q5SQH8 315 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 ANKRD26P1Q6NSI1 321 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 NANOGP8Q6NSW7 305 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 CRTC1Q6UUV9 634 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 CLVS1Q8IUQ0 354 aaPredicted RBP10.18□□□□□ -0.78
SMPD4-201ENST00000351288 SYT12Q8IV01 421 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 PHACTR4Q8IZ21 702 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 KRTCAP2Q8N6L1 136 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 FAM120BQ96EK7 910 aaKnown RBP10.18□□□□□ -0.78
SMPD4-201ENST00000351288 TTLL2Q9BWV7 592 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 NANOGQ9H9S0 305 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 PAK6Q9NQU5 681 aaPredicted RBP10.18□□□□□ -0.78
SMPD4-201ENST00000351288 FNIP2Q9P278 1114 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 LHX3Q9UBR4 397 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 PCTPQ9UKL6 214 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 INTS6Q9UL03 887 aaKnown RBP10.18□□□□□ -0.78
SMPD4-201ENST00000351288 PLAGL1Q9UM63 463 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 DGKBQ9Y6T7 804 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 SLC31A1O15431 190 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 PCCBP05166 539 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 C8BP07358 591 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 CYP2A6P11509 494 aaPredicted RBP10.18□□□□□ -0.78
SMPD4-201ENST00000351288 MAPK8P45983 427 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 BDKRB1P46663 353 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 STT3AP46977 705 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 ACSM2AQ08AH3 577 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 LSAMPQ13449 338 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 ACSM2BQ68CK6 577 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 Q6ZSR9 355 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 TPRG1Q6ZUI0 275 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 LPCAT2Q7L5N7 544 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 GOLGA7Q7Z5G4 137 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 GALNT10Q86SR1 603 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 NXPE1Q8N323 547 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 SFRP1Q8N474 314 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 ABTB1Q969K4 478 aaPredicted RBP10.18□□□□□ -0.78
SMPD4-201ENST00000351288 ITCHQ96J02 903 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 RAD9AQ99638 391 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 MRPL40Q9NQ50 206 aaKnown RBP10.18□□□□□ -0.78
SMPD4-201ENST00000351288 DNMT3BQ9UBC3 853 aaKnown RBP10.18□□□□□ -0.78
SMPD4-201ENST00000351288 AASSQ9UDR5 926 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 EBF1Q9UH73 591 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 INVSQ9Y283 1065 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 TNPO3Q9Y5L0 923 aaKnown RBP10.18□□□□□ -0.78
SMPD4-201ENST00000351288 GPR45Q9Y5Y3 372 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 SPTBN5Q9NRC6 3674 aaKnown RBP10.17□□□□□ -0.78
SMPD4-201ENST00000351288 H3BNC9 293 aa10.17□□□□□ -0.78
SMPD4-201ENST00000351288 SLC22A2O15244 555 aa10.17□□□□□ -0.78
SMPD4-201ENST00000351288 MAGEB3O15480 346 aa10.17□□□□□ -0.78
SMPD4-201ENST00000351288 RGS14O43566 566 aa10.17□□□□□ -0.78
SMPD4-201ENST00000351288 NOBOXO60393 691 aa10.17□□□□□ -0.78
SMPD4-201ENST00000351288 MAN1A2O60476 641 aa10.17□□□□□ -0.78
SMPD4-201ENST00000351288 TSPAN12O95859 305 aa10.17□□□□□ -0.78
SMPD4-201ENST00000351288 S100A3P33764 101 aa10.17□□□□□ -0.78
SMPD4-201ENST00000351288 NSG1P42857 185 aa10.17□□□□□ -0.78
SMPD4-201ENST00000351288 VAC14Q08AM6 782 aa10.17□□□□□ -0.78
SMPD4-201ENST00000351288 BLOC1S3Q6QNY0 202 aa10.17□□□□□ -0.78
SMPD4-201ENST00000351288 LIX1Q8N485 282 aa10.17□□□□□ -0.78
SMPD4-201ENST00000351288 CATSPER1Q8NEC5 780 aa10.17□□□□□ -0.78
SMPD4-201ENST00000351288 OR10A6Q8NH74 314 aa10.17□□□□□ -0.78
SMPD4-201ENST00000351288 TPD52L3Q96J77 140 aa10.17□□□□□ -0.78
SMPD4-201ENST00000351288 CCDC138Q96M89 665 aa10.17□□□□□ -0.78
SMPD4-201ENST00000351288 RHBDL2Q9NX52 303 aa10.17□□□□□ -0.78
SMPD4-201ENST00000351288 TBC1D30Q9Y2I9 924 aa10.17□□□□□ -0.78
SMPD4-201ENST00000351288 OAS3Q9Y6K5 1087 aaKnown RBP10.17□□□□□ -0.78
SMPD4-201ENST00000351288 KNTC1P50748 2209 aa10.17□□□□□ -0.78
SMPD4-201ENST00000351288 IGHA2P01877 340 aa10.17□□□□□ -0.78
SMPD4-201ENST00000351288 CATP04040 527 aaKnown RBP10.17□□□□□ -0.78
SMPD4-201ENST00000351288 IDO1P14902 403 aa10.17□□□□□ -0.78
SMPD4-201ENST00000351288 CEBPBP17676 345 aa10.17□□□□□ -0.78
SMPD4-201ENST00000351288 FASP25445 335 aa10.17□□□□□ -0.78
SMPD4-201ENST00000351288 INO80DQ53TQ3 878 aaPredicted RBP10.17□□□□□ -0.78
SMPD4-201ENST00000351288 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.17□□□□□ -0.78
SMPD4-201ENST00000351288 EFL1Q7Z2Z2 1120 aaKnown RBP10.17□□□□□ -0.78
SMPD4-201ENST00000351288 LILRA3Q8N6C8 439 aaPredicted RBP10.17□□□□□ -0.78
SMPD4-201ENST00000351288 PROKR1Q8TCW9 393 aa10.17□□□□□ -0.78
SMPD4-201ENST00000351288 NAA50Q9GZZ1 169 aaKnown RBP10.17□□□□□ -0.78
SMPD4-201ENST00000351288 IL23AQ9NPF7 189 aa10.17□□□□□ -0.78
SMPD4-201ENST00000351288 SDR39U1Q9NRG7 319 aaPredicted RBP10.17□□□□□ -0.78
SMPD4-201ENST00000351288 WARS2Q9UGM6 360 aaKnown RBP10.17□□□□□ -0.78
SMPD4-201ENST00000351288 MBD1Q9UIS9 605 aaPredicted RBP10.17□□□□□ -0.78
SMPD4-201ENST00000351288 MYRFQ9Y2G1 1151 aa10.17□□□□□ -0.78
SMPD4-201ENST00000351288 PCDHB1Q9Y5F3 818 aa10.17□□□□□ -0.78
SMPD4-201ENST00000351288 H3BM21 787 aa10.17□□□□□ -0.78
SMPD4-201ENST00000351288 H6PDO95479 791 aa10.17□□□□□ -0.78
SMPD4-201ENST00000351288 CD160O95971 181 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms