RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 IER2Q9BTL4 223 aa17.09■□□□□ 0.33
KRT28-201ENST00000306658 CCDC28BQ9BUN5 200 aa17.09■□□□□ 0.33
KRT28-201ENST00000306658 MEAF6Q9HAF1 191 aa17.09■□□□□ 0.33
KRT28-201ENST00000306658 EBF2Q9HAK2 575 aa17.09■□□□□ 0.33
KRT28-201ENST00000306658 PFDN4Q9NQP4 134 aa17.09■□□□□ 0.33
KRT28-201ENST00000306658 TRIM33Q9UPN9 1127 aa17.09■□□□□ 0.33
KRT28-201ENST00000306658 CA5BQ9Y2D0 317 aa17.09■□□□□ 0.33
KRT28-201ENST00000306658 TNFRSF10CO14798 259 aa17.08■□□□□ 0.32
KRT28-201ENST00000306658 NDUFS2O75306 463 aa17.08■□□□□ 0.32
KRT28-201ENST00000306658 UBOX5O94941 541 aa17.08■□□□□ 0.32
KRT28-201ENST00000306658 SLC35G4P0C7Q5 338 aa17.08■□□□□ 0.32
KRT28-201ENST00000306658 UROSP10746 265 aa17.08■□□□□ 0.32
KRT28-201ENST00000306658 EPHA3P29320 983 aa17.08■□□□□ 0.32
KRT28-201ENST00000306658 BDKRB1P46663 353 aa17.08■□□□□ 0.32
KRT28-201ENST00000306658 GNPDA1P46926 289 aa17.08■□□□□ 0.32
KRT28-201ENST00000306658 RABIFP47224 123 aa17.08■□□□□ 0.32
KRT28-201ENST00000306658 CXCL12P48061 93 aa17.08■□□□□ 0.32
KRT28-201ENST00000306658 SLC6A12P48065 614 aa17.08■□□□□ 0.32
KRT28-201ENST00000306658 INHBCP55103 352 aa17.08■□□□□ 0.32
KRT28-201ENST00000306658 BTKQ06187 659 aa17.08■□□□□ 0.32
KRT28-201ENST00000306658 CDC16Q13042 620 aa17.08■□□□□ 0.32
KRT28-201ENST00000306658 PTCHD3Q3KNS1 767 aa17.08■□□□□ 0.32
KRT28-201ENST00000306658 UGT3A2Q3SY77 523 aa17.08■□□□□ 0.32
KRT28-201ENST00000306658 GALNTL6Q49A17 601 aa17.08■□□□□ 0.32
KRT28-201ENST00000306658 LACTB2Q53H82 288 aaPredicted RBP17.08■□□□□ 0.32
KRT28-201ENST00000306658 MILR1Q7Z6M3 343 aa17.08■□□□□ 0.32
KRT28-201ENST00000306658 CHCHD4Q8N4Q1 142 aa17.08■□□□□ 0.32
KRT28-201ENST00000306658 TFGQ92734 400 aaPredicted RBP17.08■□□□□ 0.32
KRT28-201ENST00000306658 MAELQ96JY0 434 aaKnown RBP17.08■□□□□ 0.32
KRT28-201ENST00000306658 NUSAP1Q9BXS6 441 aaKnown RBP17.08■□□□□ 0.32
KRT28-201ENST00000306658 ZDHHC5Q9C0B5 715 aa17.08■□□□□ 0.32
KRT28-201ENST00000306658 NMUR2Q9GZQ4 415 aa17.08■□□□□ 0.32
KRT28-201ENST00000306658 WDR55Q9H6Y2 383 aaPredicted RBP17.08■□□□□ 0.32
KRT28-201ENST00000306658 CARS2Q9HA77 564 aaKnown RBP17.08■□□□□ 0.32
KRT28-201ENST00000306658 FGF22Q9HCT0 170 aa17.08■□□□□ 0.32
KRT28-201ENST00000306658 MRPL40Q9NQ50 206 aaKnown RBP17.08■□□□□ 0.32
KRT28-201ENST00000306658 ASF1AQ9Y294 204 aa17.08■□□□□ 0.32
KRT28-201ENST00000306658 DNAJC15Q9Y5T4 150 aa17.08■□□□□ 0.32
KRT28-201ENST00000306658 GOLGA8QA0A0J9YX86 632 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 GOLGA8OA6NCC3 632 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 GOLGA8NF8WBI6 632 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 OR7A17O14581 309 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 JUNP05412 331 aaKnown RBP17.07■□□□□ 0.32
KRT28-201ENST00000306658 PRDX3P30048 256 aaKnown RBP17.07■□□□□ 0.32
KRT28-201ENST00000306658 Q6ZSR6 202 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 ABI3BPQ7Z7G0 1075 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 SPDYE1Q8NFV5 336 aaPredicted RBP17.07■□□□□ 0.32
KRT28-201ENST00000306658 OR52B6Q8NGF0 335 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 CEP70Q8NHQ1 597 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 OR2M4Q96R27 311 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 OR52B2Q96RD2 323 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 PKP4Q99569 1192 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 NTMT1Q9BV86 223 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 PCED1AQ9H1Q7 454 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 OSGEPL1Q9H4B0 414 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 STOX2Q9P2F5 926 aaPredicted RBP17.07■□□□□ 0.32
KRT28-201ENST00000306658 ZNF225Q9UK10 706 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 PSMD13Q9UNM6 376 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.07■□□□□ 0.32
KRT28-201ENST00000306658 A0A1B0GTL3 188 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 A0A1W2PPC4 97 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 WDR47O94967 919 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 OR4F21O95013 312 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 DCNP07585 359 aaKnown RBP17.07■□□□□ 0.32
KRT28-201ENST00000306658 NCF2P19878 526 aaPredicted RBP17.07■□□□□ 0.32
KRT28-201ENST00000306658 IDSP22304 550 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 FOXA1P55317 472 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 ERVPABLB-1P60509 514 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 PTK2BQ14289 1009 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 TBCCQ15814 346 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 LSM12Q3MHD2 195 aaKnown RBP17.07■□□□□ 0.32
KRT28-201ENST00000306658 FAM91A1Q658Y4 838 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 NXNQ6DKJ4 435 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 AGTRAPQ6RW13 159 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 FAM160A2Q8N612 972 aaPredicted RBP17.07■□□□□ 0.32
KRT28-201ENST00000306658 FRMD1Q8N878 549 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 OR4F6Q8NGB9 312 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 OR9A1PQ8NGU1 263 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 FAM174AQ8TBP5 190 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 ACTRT2Q8TDY3 377 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 TWIST2Q8WVJ9 160 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 RAD51AP1Q96B01 352 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 C19orf60Q96EN9 201 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 KCNA7Q96RP8 456 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 CCT7Q99832 543 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 TUBB6Q9BUF5 446 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 ATG10Q9H0Y0 220 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 SAR1AQ9NR31 198 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 DNAJC11Q9NVH1 559 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 KLQ9UEF7 1012 aa17.07■□□□□ 0.32
KRT28-201ENST00000306658 COL6A3P12111 3177 aa17.06■□□□□ 0.32
KRT28-201ENST00000306658 E9PBE3 544 aa17.06■□□□□ 0.32
KRT28-201ENST00000306658 MYO1CO00159 1063 aa17.06■□□□□ 0.32
KRT28-201ENST00000306658 SDHDO14521 159 aa17.06■□□□□ 0.32
KRT28-201ENST00000306658 KLHL41O60662 606 aa17.06■□□□□ 0.32
KRT28-201ENST00000306658 SLC16A8O95907 504 aa17.06■□□□□ 0.32
KRT28-201ENST00000306658 ENO1P06733 434 aaKnown RBP17.06■□□□□ 0.32
KRT28-201ENST00000306658 EBLN1P0CF75 366 aa17.06■□□□□ 0.32
KRT28-201ENST00000306658 RPL10P27635 214 aaKnown RBP17.06■□□□□ 0.32
KRT28-201ENST00000306658 MAGEA9P43362 315 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms