RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 CHID1Q9BWS9 393 aa15.64■□□□□ 0.1
USP42-201ENST00000306177 CDADC1Q9BWV3 514 aa15.64■□□□□ 0.1
USP42-201ENST00000306177 WDR26Q9H7D7 661 aa15.64■□□□□ 0.1
USP42-201ENST00000306177 TMEM138Q9NPI0 162 aa15.64■□□□□ 0.1
USP42-201ENST00000306177 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.64■□□□□ 0.1
USP42-201ENST00000306177 DOT1LQ8TEK3 1739 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 EME2A4GXA9 379 aaPredicted RBP15.64■□□□□ 0.09
USP42-201ENST00000306177 LOC110117498-PIK3R3F6TDL0 507 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 HAS3O00219 553 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 AHSGP02765 367 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 AHSA2Q719I0 299 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 TTLQ8NG68 377 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 CDK15Q96Q40 435 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 COMMD9Q9P000 198 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 IRAK3Q9Y616 596 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 SIX3O95343 332 aaPredicted RBP15.64■□□□□ 0.09
USP42-201ENST00000306177 HAPLN1P10915 354 aaPredicted RBP15.64■□□□□ 0.09
USP42-201ENST00000306177 YAP1P46937 504 aaKnown RBP15.64■□□□□ 0.09
USP42-201ENST00000306177 SLC11A1P49279 550 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 AP1S2P56377 157 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 TCEAL1Q15170 157 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 LIN52Q52LA3 116 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 MS4A13Q5J8X5 152 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 LRRC70Q7Z2Q7 622 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 LMO3Q8TAP4 145 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 ANKRD66B4E2M5 251 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 KLF11O14901 512 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 NME6O75414 186 aaPredicted RBP15.64■□□□□ 0.09
USP42-201ENST00000306177 ADH5P11766 374 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 EFNA1P20827 205 aaPredicted RBP15.64■□□□□ 0.09
USP42-201ENST00000306177 PRPS1L1P21108 318 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 CPN2P22792 545 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 GPM6BQ13491 265 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 CHRNA6Q15825 494 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 PPP2R2DQ66LE6 453 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 POMZP3Q6PJE2 187 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 GPR22Q99680 433 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 DNAJB9Q9UBS3 223 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 SLC2A6Q9UGQ3 507 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 A0A1W2PQ45 241 aaPredicted RBP15.64■□□□□ 0.09
USP42-201ENST00000306177 A0A1W2PQY0 241 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.64■□□□□ 0.09
USP42-201ENST00000306177 MAGEA11P43364 429 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 BLKP51451 505 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 FAM91A1Q658Y4 838 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 TMEM198Q66K66 360 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 TMEM214Q6NUQ4 689 aaKnown RBP15.64■□□□□ 0.09
USP42-201ENST00000306177 FAM131AQ6UXB0 335 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 MBOAT1Q6ZNC8 495 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 SLC30A8Q8IWU4 369 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 PQLC3Q8N755 202 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 ZNF347Q96SE7 839 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 SLC38A3Q99624 504 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 TMEM248Q9NWD8 314 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 GALNT8Q9NY28 637 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 IKZF2Q9UKS7 526 aa15.64■□□□□ 0.09
USP42-201ENST00000306177 RGPD1P0DJD0 1748 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 SLC32A1Q9H598 525 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 IL1RAPQ9NPH3 570 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 FAM92AA1XBS5 289 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 ZNF487B1APH4 448 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 KDELR3O43731 214 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 EEFSECP57772 596 aaKnown RBP15.63■□□□□ 0.09
USP42-201ENST00000306177 MSS51Q4VC12 460 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 FAM182AQ5T1J6 154 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.63■□□□□ 0.09
USP42-201ENST00000306177 CTU1Q7Z7A3 348 aaKnown RBP15.63■□□□□ 0.09
USP42-201ENST00000306177 RFKQ969G6 155 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 NODALQ96S42 347 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 IL12RB2Q99665 862 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 GPATCH1Q9BRR8 931 aaKnown RBP15.63■□□□□ 0.09
USP42-201ENST00000306177 CRTAC1Q9NQ79 661 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 VPS29Q9UBQ0 182 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 WASF2Q9Y6W5 498 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 AQP12BA6NM10 295 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 TRMUO75648 421 aaKnown RBP15.63■□□□□ 0.09
USP42-201ENST00000306177 KLHL18O94889 574 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 GADD45GO95257 159 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 GIMD1P0DJR0 217 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 CBSLP0DN79 551 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 EDNRBP24530 442 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 VIPR1P32241 457 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 CBSP35520 551 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 AQP4P55087 323 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 SERINC3Q13530 473 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 AQP12AQ8IXF9 295 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 KLK6Q92876 244 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 GTPBP3Q969Y2 492 aaKnown RBP15.63■□□□□ 0.09
USP42-201ENST00000306177 XYLT2Q9H1B5 865 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 AKTIPQ9H8T0 292 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 MTMR11A4FU01 709 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 PITPNM1O00562 1244 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 SCAMP1O15126 338 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 DLX3O60479 287 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 ALOX5P09917 674 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 CCL5P13501 91 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 CCR8P51685 355 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 LRRC17Q8N6Y2 441 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 ZNF483Q8TF39 744 aaPredicted RBP15.63■□□□□ 0.09
USP42-201ENST00000306177 PYCR2Q96C36 320 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms