RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 FCRL4Q96PJ5 515 aa16.05■□□□□ 0.16
BRD3-201ENST00000303407 TUBGCP5Q96RT8 1024 aa16.05■□□□□ 0.16
BRD3-201ENST00000303407 CCDC106Q9BWC9 280 aa16.05■□□□□ 0.16
BRD3-201ENST00000303407 DCLK1O15075 740 aa16.05■□□□□ 0.16
BRD3-201ENST00000303407 SCAMP1O15126 338 aa16.05■□□□□ 0.16
BRD3-201ENST00000303407 PCDH7O60245 1069 aa16.05■□□□□ 0.16
BRD3-201ENST00000303407 CBFA2T3O75081 653 aa16.05■□□□□ 0.16
BRD3-201ENST00000303407 MTX2O75431 263 aa16.05■□□□□ 0.16
BRD3-201ENST00000303407 POU2F1P14859 743 aa16.05■□□□□ 0.16
BRD3-201ENST00000303407 UFM1P61960 85 aa16.05■□□□□ 0.16
BRD3-201ENST00000303407 ZNF252P-AS1Q0IIN9 211 aa16.05■□□□□ 0.16
BRD3-201ENST00000303407 FAM180AQ6UWF9 173 aa16.05■□□□□ 0.16
BRD3-201ENST00000303407 SRFBP1Q8NEF9 429 aaKnown RBP16.05■□□□□ 0.16
BRD3-201ENST00000303407 OR4F6Q8NGB9 312 aa16.05■□□□□ 0.16
BRD3-201ENST00000303407 CANT1Q8WVQ1 401 aa16.05■□□□□ 0.16
BRD3-201ENST00000303407 KCNA7Q96RP8 456 aa16.05■□□□□ 0.16
BRD3-201ENST00000303407 LOC110117498-PIK3R3F6TDL0 507 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 VIPP01282 170 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 IFNGP01579 166 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 DNAJB13P59910 316 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 LARS2Q15031 903 aaKnown RBP16.04■□□□□ 0.16
BRD3-201ENST00000303407 RAB6CQ53S08 254 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 PDE12Q6L8Q7 609 aaKnown RBP16.04■□□□□ 0.16
BRD3-201ENST00000303407 ST13P5Q8NFI4 369 aaPredicted RBP16.04■□□□□ 0.16
BRD3-201ENST00000303407 CYB5D2Q8WUJ1 264 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 FAR1Q8WVX9 515 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 C1orf74Q96LT6 269 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 RAB6CQ9H0N0 254 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 PCBD2Q9H0N5 130 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 SLC32A1Q9H598 525 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 IGKV6-21A0A0C4DH24 114 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 A0A1W2PQ45 241 aaPredicted RBP16.04■□□□□ 0.16
BRD3-201ENST00000303407 A0A1W2PQY0 241 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 PDPK1O15530 556 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 GJA1P17302 382 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 NT5EP21589 574 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 CDH3P22223 829 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 MAGEA11P43364 429 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 LGALS3BPQ08380 585 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 ZNF155Q12901 538 aaPredicted RBP16.04■□□□□ 0.16
BRD3-201ENST00000303407 DPY19L1Q2PZI1 675 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 FAM131AQ6UXB0 335 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 ADGRG2Q8IZP9 1017 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 ZNF483Q8TF39 744 aaPredicted RBP16.04■□□□□ 0.16
BRD3-201ENST00000303407 PKP2Q99959 881 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 MRPS33Q9Y291 106 aaKnown RBP16.04■□□□□ 0.16
BRD3-201ENST00000303407 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.04■□□□□ 0.16
BRD3-201ENST00000303407 CASKO14936 926 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 PAPSS2O95340 614 aaPredicted RBP16.04■□□□□ 0.16
BRD3-201ENST00000303407 PROZP22891 400 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 TOMM20Q15388 145 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 TOP1MTQ969P6 601 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 LMLNQ96KR4 655 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 A0A0D9SEW6 157 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 WNT9AO14904 365 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 ATP1B2P14415 290 aaPredicted RBP16.04■□□□□ 0.16
BRD3-201ENST00000303407 CASP9P55211 416 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 HEPACAMQ14CZ8 416 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 CNKSR3Q6P9H4 555 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 OR2AP1Q8NGE2 309 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 MOSPD2Q8NHP6 518 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 NWD2Q9ULI1 1742 aa16.04■□□□□ 0.16
BRD3-201ENST00000303407 MATN2O00339 956 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 MPZL2O60487 215 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 CBSLP0DN79 551 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 CBSP35520 551 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 FOXM1Q08050 763 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 ALG11Q2TAA5 492 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 VITQ6UXI7 678 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 GPR65Q8IYL9 337 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 RASSF5Q8WWW0 418 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 DNASE1L2Q92874 299 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 CLEC4MQ9H2X3 399 aaPredicted RBP16.03■□□□□ 0.16
BRD3-201ENST00000303407 VARSP26640 1264 aaKnown RBP16.03■□□□□ 0.16
BRD3-201ENST00000303407 DGKQP52824 942 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 ZBTB6Q15916 424 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 MYLK3Q32MK0 819 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 ATP13A5Q4VNC0 1218 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.03■□□□□ 0.16
BRD3-201ENST00000303407 P2RY8Q86VZ1 359 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 OR9I1Q8NGQ6 314 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 WFIKKN2Q8TEU8 576 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 TRIM63Q969Q1 353 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 C1GALT1C1Q96EU7 318 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 SRRDQ9UH36 339 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 SNPHO15079 494 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 ALOX5P09917 674 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 ATG14Q6ZNE5 492 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 ZNF570Q96NI8 536 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 AOC2O75106 756 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 GADD45GO95257 159 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 CD247P20963 164 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 C7orf61Q8IZ16 206 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 KIAA1191Q96A73 305 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 CGREF1Q99674 301 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 FEM1AQ9BSK4 669 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 HTATIP2Q9BUP3 242 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 OAZ3Q9UMX2 235 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 FAM86C2PA6NEL3 165 aa16.03■□□□□ 0.16
BRD3-201ENST00000303407 PDLIM1O00151 329 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms